RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 F6X3S4 739 aa17.21■□□□□ 0.35
UPK1A-201ENST00000222275 CCT4P50991 539 aaKnown RBP17.21■□□□□ 0.35
UPK1A-201ENST00000222275 MAP1SQ66K74 1059 aaPredicted RBP17.21■□□□□ 0.35
UPK1A-201ENST00000222275 SLC4A10Q6U841 1118 aa17.21■□□□□ 0.35
UPK1A-201ENST00000222275 TTLL11Q8NHH1 800 aa17.21■□□□□ 0.35
UPK1A-201ENST00000222275 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
UPK1A-201ENST00000222275 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
UPK1A-201ENST00000222275 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
UPK1A-201ENST00000222275 TBC1D16Q8TBP0 767 aa17.2■□□□□ 0.34
UPK1A-201ENST00000222275 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
UPK1A-201ENST00000222275 GCKRQ14397 625 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 BEND3Q5T5X7 828 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 JMYQ8N9B5 988 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 SUPT20HQ8NEM7 779 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
UPK1A-201ENST00000222275 GREM2Q9H772 168 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 SCN4AP35499 1836 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
UPK1A-201ENST00000222275 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
UPK1A-201ENST00000222275 CTSWP56202 376 aa17.18■□□□□ 0.34
UPK1A-201ENST00000222275 UBE3BQ7Z3V4 1068 aa17.18■□□□□ 0.34
UPK1A-201ENST00000222275 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
UPK1A-201ENST00000222275 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
UPK1A-201ENST00000222275 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
UPK1A-201ENST00000222275 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
UPK1A-201ENST00000222275 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
UPK1A-201ENST00000222275 TRIM27P14373 513 aa17.17■□□□□ 0.34
UPK1A-201ENST00000222275 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
UPK1A-201ENST00000222275 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
UPK1A-201ENST00000222275 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
UPK1A-201ENST00000222275 GPRC5DQ9NZD1 345 aa17.17■□□□□ 0.34
UPK1A-201ENST00000222275 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
UPK1A-201ENST00000222275 CIAPIN1Q6FI81 312 aa17.16■□□□□ 0.34
UPK1A-201ENST00000222275 DZIP1LQ8IYY4 767 aaKnown RBP17.16■□□□□ 0.34
UPK1A-201ENST00000222275 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
UPK1A-201ENST00000222275 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
UPK1A-201ENST00000222275 RTL9Q8NET4 1388 aa17.15■□□□□ 0.34
UPK1A-201ENST00000222275 PSMD14O00487 310 aa17.15■□□□□ 0.34
UPK1A-201ENST00000222275 CSF1RP07333 972 aa17.15■□□□□ 0.34
UPK1A-201ENST00000222275 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
UPK1A-201ENST00000222275 INTS3Q68E01 1043 aaKnown RBP17.15■□□□□ 0.34
UPK1A-201ENST00000222275 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
UPK1A-201ENST00000222275 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
UPK1A-201ENST00000222275 TRAF5O00463 557 aa17.14■□□□□ 0.33
UPK1A-201ENST00000222275 EGFRP00533 1210 aa17.14■□□□□ 0.33
UPK1A-201ENST00000222275 FOXO4P98177 505 aa17.14■□□□□ 0.33
UPK1A-201ENST00000222275 TRPM4Q8TD43 1214 aa17.14■□□□□ 0.33
UPK1A-201ENST00000222275 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
UPK1A-201ENST00000222275 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
UPK1A-201ENST00000222275 CREBZFQ9NS37 354 aa17.14■□□□□ 0.33
UPK1A-201ENST00000222275 MKRN1Q9UHC7 482 aaKnown RBP17.14■□□□□ 0.33
UPK1A-201ENST00000222275 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
UPK1A-201ENST00000222275 GRM8O00222 908 aa17.13■□□□□ 0.33
UPK1A-201ENST00000222275 UFL1O94874 794 aa17.13■□□□□ 0.33
UPK1A-201ENST00000222275 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
UPK1A-201ENST00000222275 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
UPK1A-201ENST00000222275 CNOT7Q9UIV1 285 aaKnown RBP17.13■□□□□ 0.33
UPK1A-201ENST00000222275 ECE2O60344 883 aa17.12■□□□□ 0.33
UPK1A-201ENST00000222275 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
UPK1A-201ENST00000222275 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
UPK1A-201ENST00000222275 CST9Q5W186 159 aa17.12■□□□□ 0.33
UPK1A-201ENST00000222275 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
UPK1A-201ENST00000222275 TXNRD3Q86VQ6 643 aa17.12■□□□□ 0.33
UPK1A-201ENST00000222275 CLUAP1Q96AJ1 413 aa17.12■□□□□ 0.33
UPK1A-201ENST00000222275 ADARB2Q9NS39 739 aaKnown RBP17.12■□□□□ 0.33
UPK1A-201ENST00000222275 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
UPK1A-201ENST00000222275 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
UPK1A-201ENST00000222275 SNAP23O00161 211 aa17.11■□□□□ 0.33
UPK1A-201ENST00000222275 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
UPK1A-201ENST00000222275 TNIP1Q15025 636 aa17.11■□□□□ 0.33
UPK1A-201ENST00000222275 SAMD7Q7Z3H4 446 aa17.11■□□□□ 0.33
UPK1A-201ENST00000222275 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
UPK1A-201ENST00000222275 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
UPK1A-201ENST00000222275 SCN9AQ15858 1988 aa17.1■□□□□ 0.33
UPK1A-201ENST00000222275 GNAI3P08754 354 aa17.1■□□□□ 0.33
UPK1A-201ENST00000222275 VIL1P09327 827 aaKnown RBP17.1■□□□□ 0.33
UPK1A-201ENST00000222275 ITGA6P23229 1130 aa17.1■□□□□ 0.33
UPK1A-201ENST00000222275 KLRK1P26718 216 aa17.1■□□□□ 0.33
UPK1A-201ENST00000222275 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
UPK1A-201ENST00000222275 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
UPK1A-201ENST00000222275 UTYO14607 1347 aa17.1■□□□□ 0.33
UPK1A-201ENST00000222275 TMEM88BA6NKF7 163 aa17.09■□□□□ 0.33
UPK1A-201ENST00000222275 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
UPK1A-201ENST00000222275 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
UPK1A-201ENST00000222275 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
UPK1A-201ENST00000222275 XDHP47989 1333 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 VEGFBP49765 207 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 ITPRIPQ8IWB1 547 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 DPF2Q92785 391 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 CDC5LQ99459 802 aaKnown RBP17.08■□□□□ 0.32
UPK1A-201ENST00000222275 EYA3Q99504 573 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 MXD3Q9BW11 206 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
UPK1A-201ENST00000222275 CNTNAP1P78357 1384 aa17.07■□□□□ 0.32
UPK1A-201ENST00000222275 ASTN2O75129 1339 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms