RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
TIMP1-201ENST00000218388 BCS1LQ9Y276 419 aa16.32■□□□□ 0.2
TIMP1-201ENST00000218388 NOP58Q9Y2X3 529 aaKnown RBP16.32■□□□□ 0.2
TIMP1-201ENST00000218388 ATP6V0A2Q9Y487 856 aa16.32■□□□□ 0.2
TIMP1-201ENST00000218388 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
TIMP1-201ENST00000218388 COL4A1P02462 1669 aa16.31■□□□□ 0.2
TIMP1-201ENST00000218388 MROH5Q6ZUA9 1318 aa16.31■□□□□ 0.2
TIMP1-201ENST00000218388 ANKRD2Q9GZV1 360 aa16.31■□□□□ 0.2
TIMP1-201ENST00000218388 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
TIMP1-201ENST00000218388 METTL24Q5JXM2 366 aa16.3■□□□□ 0.2
TIMP1-201ENST00000218388 C21orf2O43822 256 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 RAB11FIP3O75154 756 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 CHRNDQ07001 517 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 PUS3Q9BZE2 481 aaKnown RBP16.29■□□□□ 0.2
TIMP1-201ENST00000218388 ANKIB1Q9P2G1 1089 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 RIPOR2Q9Y4F9 1068 aa16.29■□□□□ 0.2
TIMP1-201ENST00000218388 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 XDHP47989 1333 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 RTKN2Q8IZC4 609 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 DCTPP1Q9H773 170 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 CEP126Q9P2H0 1117 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
TIMP1-201ENST00000218388 EXOC6BQ9Y2D4 811 aa16.28■□□□□ 0.2
TIMP1-201ENST00000218388 KCNJ4P48050 445 aa16.27■□□□□ 0.2
TIMP1-201ENST00000218388 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
TIMP1-201ENST00000218388 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
TIMP1-201ENST00000218388 MPNDQ8N594 471 aa16.27■□□□□ 0.2
TIMP1-201ENST00000218388 KIF1BPQ96EK5 621 aa16.27■□□□□ 0.2
TIMP1-201ENST00000218388 PPP4R2Q9NY27 417 aa16.27■□□□□ 0.2
TIMP1-201ENST00000218388 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
TIMP1-201ENST00000218388 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.2
TIMP1-201ENST00000218388 ATP2B4P23634 1241 aa16.26■□□□□ 0.19
TIMP1-201ENST00000218388 SUPT20HQ8NEM7 779 aa16.26■□□□□ 0.19
TIMP1-201ENST00000218388 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
TIMP1-201ENST00000218388 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
TIMP1-201ENST00000218388 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
TIMP1-201ENST00000218388 LEMD3Q9Y2U8 911 aa16.26■□□□□ 0.19
TIMP1-201ENST00000218388 PDE8BO95263 885 aa16.25■□□□□ 0.19
TIMP1-201ENST00000218388 GPSM2P81274 684 aa16.25■□□□□ 0.19
TIMP1-201ENST00000218388 GPR162Q16538 588 aa16.25■□□□□ 0.19
TIMP1-201ENST00000218388 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
TIMP1-201ENST00000218388 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 APBB1O00213 710 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 TAF5LO75529 589 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 UFL1O94874 794 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 IGHDP01880 384 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 TFCP2Q12800 502 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 UBE4AQ14139 1066 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
TIMP1-201ENST00000218388 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
TIMP1-201ENST00000218388 RHPN1Q8TCX5 695 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 EYA3Q99504 573 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 LTBP1Q14766 1721 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 FER1L6Q2WGJ9 1857 aa16.24■□□□□ 0.19
TIMP1-201ENST00000218388 ZNF804BA4D1E1 1349 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 C6orf229H3BNL8 230 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 SASH1O94885 1247 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
TIMP1-201ENST00000218388 SLC5A1P13866 664 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
TIMP1-201ENST00000218388 OLFM4Q6UX06 510 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 CLASRPQ8N2M8 674 aaKnown RBP16.23■□□□□ 0.19
TIMP1-201ENST00000218388 VGLL2Q8N8G2 317 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 PSMD1Q99460 953 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 TAOK3Q9H2K8 898 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 GPR108Q9NPR9 543 aa16.23■□□□□ 0.19
TIMP1-201ENST00000218388 SNED1Q8TER0 1413 aa16.22■□□□□ 0.19
TIMP1-201ENST00000218388 ATP2B3Q16720 1220 aa16.22■□□□□ 0.19
TIMP1-201ENST00000218388 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
TIMP1-201ENST00000218388 TBC1D16Q8TBP0 767 aa16.22■□□□□ 0.19
TIMP1-201ENST00000218388 LPIN2Q92539 896 aa16.22■□□□□ 0.19
TIMP1-201ENST00000218388 RTFDC1Q9BY42 306 aaPredicted RBP16.22■□□□□ 0.19
TIMP1-201ENST00000218388 LTBP3Q9NS15 1303 aa16.21■□□□□ 0.19
TIMP1-201ENST00000218388 ZNF609O15014 1411 aa16.21■□□□□ 0.19
TIMP1-201ENST00000218388 YBX3P16989 372 aaKnown RBP eCLIP16.21■□□□□ 0.196e-10■■□□□ 13.5
TIMP1-201ENST00000218388 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
TIMP1-201ENST00000218388 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
TIMP1-201ENST00000218388 DUOX1Q9NRD9 1551 aa16.21■□□□□ 0.18
TIMP1-201ENST00000218388 ARAP2Q8WZ64 1704 aa16.2■□□□□ 0.18
TIMP1-201ENST00000218388 TNNI3KQ59H18 835 aa16.2■□□□□ 0.18
TIMP1-201ENST00000218388 ANKRD45Q5TZF3 282 aa16.2■□□□□ 0.18
TIMP1-201ENST00000218388 SLC51AQ86UW1 340 aa16.2■□□□□ 0.18
TIMP1-201ENST00000218388 ZC3H12CQ9C0D7 883 aaKnown RBP16.2■□□□□ 0.18
TIMP1-201ENST00000218388 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
TIMP1-201ENST00000218388 FPGT-TNNI3KV9GXZ4 949 aa16.2■□□□□ 0.18
TIMP1-201ENST00000218388 MED23Q9ULK4 1368 aa16.2■□□□□ 0.18
TIMP1-201ENST00000218388 A0A1B0GUL7 405 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 IFIT2P09913 472 aaKnown RBP16.19■□□□□ 0.18
TIMP1-201ENST00000218388 FGFR2P21802 821 aa16.19■□□□□ 0.18
TIMP1-201ENST00000218388 WASHC4Q2M389 1173 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms