RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 BRCA1P38398 1863 aaKnown RBP33.77■■■■□ 3
CHMP4B-201ENST00000217402 CIAO1O76071 339 aa33.76■■■■□ 3
CHMP4B-201ENST00000217402 DALRD3Q5D0E6 543 aaKnown RBP33.76■■■■□ 3
CHMP4B-201ENST00000217402 DCTPP1Q9H773 170 aa33.76■■■■□ 3
CHMP4B-201ENST00000217402 GTF3C3Q9Y5Q9 886 aa33.76■■■■□ 3
CHMP4B-201ENST00000217402 B4GALNT3Q6L9W6 998 aa33.75■■■□□ 2.99
CHMP4B-201ENST00000217402 OLFM4Q6UX06 510 aa33.75■■■□□ 2.99
CHMP4B-201ENST00000217402 RIPOR2Q9Y4F9 1068 aa33.75■■■□□ 2.99
CHMP4B-201ENST00000217402 TMC4Q7Z404 712 aa33.75■■■□□ 2.99
CHMP4B-201ENST00000217402 FBXO3Q9UK99 471 aa33.75■■■□□ 2.99
CHMP4B-201ENST00000217402 ATP6V0A2Q9Y487 856 aa33.75■■■□□ 2.99
CHMP4B-201ENST00000217402 IL15P40933 162 aaPredicted RBP33.74■■■□□ 2.99
CHMP4B-201ENST00000217402 MINPP1Q9UNW1 487 aa33.74■■■□□ 2.99
CHMP4B-201ENST00000217402 BCS1LQ9Y276 419 aa33.74■■■□□ 2.99
CHMP4B-201ENST00000217402 METTL24Q5JXM2 366 aa33.73■■■□□ 2.99
CHMP4B-201ENST00000217402 C21orf2O43822 256 aa33.72■■■□□ 2.99
CHMP4B-201ENST00000217402 CHRNDQ07001 517 aa33.72■■■□□ 2.99
CHMP4B-201ENST00000217402 HSP90AB4PQ58FF6 505 aa33.72■■■□□ 2.99
CHMP4B-201ENST00000217402 SP8Q8IXZ3 490 aa33.72■■■□□ 2.99
CHMP4B-201ENST00000217402 HELBQ8NG08 1087 aaPredicted RBP33.72■■■□□ 2.99
CHMP4B-201ENST00000217402 MROH5Q6ZUA9 1318 aa33.71■■■□□ 2.99
CHMP4B-201ENST00000217402 TMX4Q9H1E5 349 aaPredicted RBP33.71■■■□□ 2.99
CHMP4B-201ENST00000217402 LRRC37AA6NMS7 1700 aa33.71■■■□□ 2.99
CHMP4B-201ENST00000217402 SASH1O94885 1247 aa33.7■■■□□ 2.99
CHMP4B-201ENST00000217402 C7orf43Q8WVR3 580 aa33.7■■■□□ 2.99
CHMP4B-201ENST00000217402 GOLGB1Q14789 3259 aaKnown RBP33.69■■■□□ 2.98
CHMP4B-201ENST00000217402 TAF5LO75529 589 aa33.69■■■□□ 2.98
CHMP4B-201ENST00000217402 TFCP2Q12800 502 aa33.69■■■□□ 2.98
CHMP4B-201ENST00000217402 GCC1Q96CN9 775 aa33.69■■■□□ 2.98
CHMP4B-201ENST00000217402 BCL11AQ9H165 835 aa33.69■■■□□ 2.98
CHMP4B-201ENST00000217402 ERC1Q8IUD2 1116 aa33.68■■■□□ 2.98
CHMP4B-201ENST00000217402 ANKIB1Q9P2G1 1089 aa33.68■■■□□ 2.98
CHMP4B-201ENST00000217402 RAB11FIP3O75154 756 aa33.68■■■□□ 2.98
CHMP4B-201ENST00000217402 GPSM2P81274 684 aa33.68■■■□□ 2.98
CHMP4B-201ENST00000217402 CEP126Q9P2H0 1117 aa33.68■■■□□ 2.98
CHMP4B-201ENST00000217402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.68■■■□□ 2.98
CHMP4B-201ENST00000217402 SMC5Q8IY18 1101 aa33.67■■■□□ 2.98
CHMP4B-201ENST00000217402 RHPN1Q8TCX5 695 aa33.67■■■□□ 2.98
CHMP4B-201ENST00000217402 NSFL1CQ9UNZ2 370 aaKnown RBP33.67■■■□□ 2.98
CHMP4B-201ENST00000217402 ANKRD2Q9GZV1 360 aa33.66■■■□□ 2.98
CHMP4B-201ENST00000217402 A0A1B0GUL6 1792 aa33.65■■■□□ 2.98
CHMP4B-201ENST00000217402 PELP1Q8IZL8 1130 aaKnown RBP33.65■■■□□ 2.98
CHMP4B-201ENST00000217402 VGLL2Q8N8G2 317 aa33.65■■■□□ 2.98
CHMP4B-201ENST00000217402 KIF1BPQ96EK5 621 aa33.65■■■□□ 2.98
CHMP4B-201ENST00000217402 KDM2BQ8NHM5 1336 aa33.65■■■□□ 2.98
CHMP4B-201ENST00000217402 LRRCC1Q9C099 1032 aa33.64■■■□□ 2.98
CHMP4B-201ENST00000217402 IL1RAPL2Q9NP60 686 aa33.64■■■□□ 2.98
CHMP4B-201ENST00000217402 XDHP47989 1333 aa33.64■■■□□ 2.98
CHMP4B-201ENST00000217402 PDE8BO95263 885 aa33.64■■■□□ 2.98
CHMP4B-201ENST00000217402 SNAP23O00161 211 aa33.63■■■□□ 2.97
CHMP4B-201ENST00000217402 SMARCA5O60264 1052 aaPredicted RBP33.63■■■□□ 2.97
CHMP4B-201ENST00000217402 CCDC93Q567U6 631 aa33.63■■■□□ 2.97
CHMP4B-201ENST00000217402 CENPQQ7L2Z9 268 aaPredicted RBP33.63■■■□□ 2.97
CHMP4B-201ENST00000217402 MPNDQ8N594 471 aa33.63■■■□□ 2.97
CHMP4B-201ENST00000217402 WTIPA6NIX2 430 aaPredicted RBP33.62■■■□□ 2.97
CHMP4B-201ENST00000217402 ANKRD45Q5TZF3 282 aa33.62■■■□□ 2.97
CHMP4B-201ENST00000217402 CC2D2BQ6DHV5 1058 aa33.62■■■□□ 2.97
CHMP4B-201ENST00000217402 DPP8Q6V1X1 898 aaPredicted RBP33.62■■■□□ 2.97
CHMP4B-201ENST00000217402 KCNJ4P48050 445 aa33.61■■■□□ 2.97
CHMP4B-201ENST00000217402 SOGA3Q5TF21 947 aa33.61■■■□□ 2.97
CHMP4B-201ENST00000217402 UFL1O94874 794 aa33.6■■■□□ 2.97
CHMP4B-201ENST00000217402 PODXL2Q9NZ53 605 aa33.6■■■□□ 2.97
CHMP4B-201ENST00000217402 GGA1Q9UJY5 639 aa33.6■■■□□ 2.97
CHMP4B-201ENST00000217402 LTBP1Q14766 1721 aa33.6■■■□□ 2.97
CHMP4B-201ENST00000217402 SNED1Q8TER0 1413 aa33.59■■■□□ 2.97
CHMP4B-201ENST00000217402 PUM3Q15397 648 aaKnown RBP33.59■■■□□ 2.97
CHMP4B-201ENST00000217402 ARFGEF1Q9Y6D6 1849 aa33.59■■■□□ 2.97
CHMP4B-201ENST00000217402 ATP2B3Q16720 1220 aa33.58■■■□□ 2.97
CHMP4B-201ENST00000217402 ZBTB47Q9UFB7 747 aaPredicted RBP33.58■■■□□ 2.97
CHMP4B-201ENST00000217402 DUOX1Q9NRD9 1551 aa33.58■■■□□ 2.97
CHMP4B-201ENST00000217402 ZNF804BA4D1E1 1349 aa33.58■■■□□ 2.97
CHMP4B-201ENST00000217402 YBX3P16989 372 aaKnown RBP eCLIP33.57■■■□□ 2.972e-7■■■□□ 14.7
CHMP4B-201ENST00000217402 TNNI3KQ59H18 835 aa33.57■■■□□ 2.97
CHMP4B-201ENST00000217402 RTKN2Q8IZC4 609 aa33.57■■■□□ 2.97
CHMP4B-201ENST00000217402 TBC1D16Q8TBP0 767 aa33.57■■■□□ 2.97
CHMP4B-201ENST00000217402 GPR101Q96P66 508 aaPredicted RBP33.57■■■□□ 2.97
CHMP4B-201ENST00000217402 POLLQ9UGP5 575 aa33.57■■■□□ 2.97
CHMP4B-201ENST00000217402 AKAP2Q9Y2D5 859 aa33.57■■■□□ 2.97
CHMP4B-201ENST00000217402 FPGT-TNNI3KV9GXZ4 949 aa33.57■■■□□ 2.97
CHMP4B-201ENST00000217402 ZNF609O15014 1411 aa33.57■■■□□ 2.96
CHMP4B-201ENST00000217402 C6orf229H3BNL8 230 aa33.57■■■□□ 2.96
CHMP4B-201ENST00000217402 ATP2B4P23634 1241 aa33.57■■■□□ 2.96
CHMP4B-201ENST00000217402 CLASRPQ8N2M8 674 aaKnown RBP33.56■■■□□ 2.96
CHMP4B-201ENST00000217402 LEMD3Q9Y2U8 911 aa33.56■■■□□ 2.96
CHMP4B-201ENST00000217402 A0A1B0GUL7 405 aa33.55■■■□□ 2.96
CHMP4B-201ENST00000217402 NUCB1Q02818 461 aa33.55■■■□□ 2.96
CHMP4B-201ENST00000217402 AACSQ86V21 672 aa33.55■■■□□ 2.96
CHMP4B-201ENST00000217402 FGFR2P21802 821 aa33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 TIMM10P62072 90 aa33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 UBE4AQ14139 1066 aa33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 GRIPAP1Q4V328 841 aa33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 EAF2Q96CJ1 260 aaPredicted RBP33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 NEUROD6Q96NK8 337 aa33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 LNPKQ9C0E8 428 aa33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 GPR108Q9NPR9 543 aa33.54■■■□□ 2.96
CHMP4B-201ENST00000217402 KLRK1P26718 216 aa33.53■■■□□ 2.96
CHMP4B-201ENST00000217402 LPIN2Q92539 896 aa33.53■■■□□ 2.96
CHMP4B-201ENST00000217402 SLC5A1P13866 664 aa33.53■■■□□ 2.96
CHMP4B-201ENST00000217402 CHD1LQ86WJ1 897 aa33.53■■■□□ 2.96
CHMP4B-201ENST00000217402 GPR162Q16538 588 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms