RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 LUZP1Q86V48 1076 aa21.65■■□□□ 1.06
MBD3-201ENST00000156825 VPS36Q86VN1 386 aa21.65■■□□□ 1.06
MBD3-201ENST00000156825 MAGEB6Q8N7X4 407 aa21.65■■□□□ 1.06
MBD3-201ENST00000156825 KRT23Q9C075 422 aa21.65■■□□□ 1.06
MBD3-201ENST00000156825 ZSCAN16Q9H4T2 348 aaPredicted RBP21.65■■□□□ 1.06
MBD3-201ENST00000156825 MYO1BO43795 1136 aa21.64■■□□□ 1.06
MBD3-201ENST00000156825 TOM1O60784 492 aa21.64■■□□□ 1.06
MBD3-201ENST00000156825 POTEJP0CG39 1038 aa21.64■■□□□ 1.06
MBD3-201ENST00000156825 KIAA0754O94854 1291 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 RIMBP2O15034 1052 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 N4BP3O15049 544 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 ECM2O94769 699 aaPredicted RBP21.64■■□□□ 1.05
MBD3-201ENST00000156825 HMGB2P26583 209 aaKnown RBP21.64■■□□□ 1.05
MBD3-201ENST00000156825 CBX1P83916 185 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 PLCD4Q9BRC7 762 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 ANO6Q4KMQ2 910 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 DDX17Q92841 729 aaKnown RBP21.64■■□□□ 1.05
MBD3-201ENST00000156825 TRIM47Q96LD4 638 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
MBD3-201ENST00000156825 ZKSCAN3Q9BRR0 538 aa21.63■■□□□ 1.05
MBD3-201ENST00000156825 LGR6Q9HBX8 967 aa21.63■■□□□ 1.05
MBD3-201ENST00000156825 WDR7Q9Y4E6 1490 aa21.63■■□□□ 1.05
MBD3-201ENST00000156825 NBPF7P0C2Y1 421 aaPredicted RBP21.63■■□□□ 1.05
MBD3-201ENST00000156825 SYCP3Q8IZU3 236 aa21.63■■□□□ 1.05
MBD3-201ENST00000156825 FGFR1OPO95684 399 aaKnown RBP21.63■■□□□ 1.05
MBD3-201ENST00000156825 DCAF5Q96JK2 942 aa21.63■■□□□ 1.05
MBD3-201ENST00000156825 MCM9Q9NXL9 1143 aa21.63■■□□□ 1.05
MBD3-201ENST00000156825 TMCO5BA8MYB1 307 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 PRDM10Q9NQV6 1147 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 AMPD3Q01432 767 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 CREB3L3Q68CJ9 461 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 ABCC1P33527 1531 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 ZMYM3Q14202 1370 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 DNAJC25Q9H1X3 360 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 NUP160Q12769 1436 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 PRPF4BQ13523 1007 aaKnown RBP21.62■■□□□ 1.05
MBD3-201ENST00000156825 RRAGBQ5VZM2 374 aa21.62■■□□□ 1.05
MBD3-201ENST00000156825 RNF216Q9NWF9 866 aaPredicted RBP21.62■■□□□ 1.05
MBD3-201ENST00000156825 KIF2AO00139 706 aaPredicted RBP21.61■■□□□ 1.05
MBD3-201ENST00000156825 IP6K1Q92551 441 aa21.61■■□□□ 1.05
MBD3-201ENST00000156825 RBM26Q5T8P6 1007 aaKnown RBP21.61■■□□□ 1.05
MBD3-201ENST00000156825 CCDC129Q6ZRS4 1044 aa21.61■■□□□ 1.05
MBD3-201ENST00000156825 F13A1P00488 732 aa21.61■■□□□ 1.05
MBD3-201ENST00000156825 NOP2P46087 812 aaKnown RBP21.61■■□□□ 1.05
MBD3-201ENST00000156825 SOS1Q07889 1333 aaPredicted RBP21.61■■□□□ 1.05
MBD3-201ENST00000156825 MAGEB6P1A0A0J9YX57 407 aa21.61■■□□□ 1.05
MBD3-201ENST00000156825 USO1O60763 962 aaKnown RBP21.61■■□□□ 1.05
MBD3-201ENST00000156825 CHMLP26374 656 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 SMC5Q8IY18 1101 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 GOPCQ9HD26 462 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 RNF113AO15541 343 aaKnown RBP21.6■■□□□ 1.05
MBD3-201ENST00000156825 GSTO1P78417 241 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 TFCP2L1Q9NZI6 479 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 NDUFB9Q9Y6M9 179 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 POLR3GO15318 223 aaPredicted RBP21.6■■□□□ 1.05
MBD3-201ENST00000156825 KIF20AO95235 890 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 DESP17661 470 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 TPTE2Q6XPS3 522 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 GSTTP1A0A1W2PQM5 241 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 ANAPC15P60006 121 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 ZBTB7BO15156 539 aaPredicted RBP21.6■■□□□ 1.05
MBD3-201ENST00000156825 CCDC24Q8N4L8 307 aa21.6■■□□□ 1.05
MBD3-201ENST00000156825 LRSAM1Q6UWE0 723 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 ZC3H12CQ9C0D7 883 aaKnown RBP21.59■■□□□ 1.05
MBD3-201ENST00000156825 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 CETN2P41208 172 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 PAFAH1B1P43034 410 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 NAPAP54920 295 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 UBASH3AP57075 661 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 MRPS27Q92552 414 aaKnown RBP21.59■■□□□ 1.05
MBD3-201ENST00000156825 SMARCC1Q92922 1105 aaPredicted RBP21.59■■□□□ 1.05
MBD3-201ENST00000156825 DHX58Q96C10 678 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 ZNF594Q96JF6 807 aaPredicted RBP21.59■■□□□ 1.05
MBD3-201ENST00000156825 CNNM2Q9H8M5 875 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 VEZTQ9HBM0 779 aa21.59■■□□□ 1.05
MBD3-201ENST00000156825 RTCBQ9Y3I0 505 aaKnown RBP21.59■■□□□ 1.05
MBD3-201ENST00000156825 PUF60Q9UHX1 559 aaKnown RBP21.59■■□□□ 1.05
MBD3-201ENST00000156825 STAT6P42226 847 aa21.58■■□□□ 1.05
MBD3-201ENST00000156825 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
MBD3-201ENST00000156825 GNG11P61952 73 aa21.58■■□□□ 1.05
MBD3-201ENST00000156825 EHMT1Q9H9B1 1298 aa21.58■■□□□ 1.05
MBD3-201ENST00000156825 EXOC1Q9NV70 894 aa21.58■■□□□ 1.05
MBD3-201ENST00000156825 YTHDC2Q9H6S0 1430 aaKnown RBP21.58■■□□□ 1.04
MBD3-201ENST00000156825 A1BGP04217 495 aa21.58■■□□□ 1.04
MBD3-201ENST00000156825 LMOD1P29536 600 aaPredicted RBP21.58■■□□□ 1.04
MBD3-201ENST00000156825 AOPEPQ8N6M6 819 aa21.58■■□□□ 1.04
MBD3-201ENST00000156825 ZNF790Q6PG37 636 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 GSDMDP57764 484 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 TMTC2Q8N394 836 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 OGFOD1Q8N543 542 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 ZBTB9Q96C00 473 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 TRIM21P19474 475 aaKnown RBP21.57■■□□□ 1.04
MBD3-201ENST00000156825 SNW1Q13573 536 aaKnown RBP21.57■■□□□ 1.04
MBD3-201ENST00000156825 HLTFQ14527 1009 aaKnown RBP eCLIP21.57■■□□□ 1.04
MBD3-201ENST00000156825 CCDC186Q7Z3E2 898 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 PLIN2Q99541 437 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 BCCIPQ9P287 314 aaKnown RBP eCLIP21.57■■□□□ 1.04
MBD3-201ENST00000156825 KCNG4Q8TDN1 519 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 TTC41PQ6P2S7 1318 aa21.57■■□□□ 1.04
MBD3-201ENST00000156825 GNPATO15228 680 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms