RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	MT-ND1	P03886	318 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	EPHA1	P21709	976 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	ERVS71-1	P61550	626 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	SLC3A1	Q07837	685 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	TOP3A	Q13472	1001 aa	Predicted RBP	12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	SGCA	Q16586	387 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	VMAC	Q2NL98	169 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	ZNF718	Q3SXZ3	478 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	ZMAT1	Q5H9K5	638 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	FAM209A	Q5JX71	171 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	ALDH16A1	Q8IZ83	802 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	PAQR4	Q8N4S7	273 aa	Predicted RBP	12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	PFN4	Q8NHR9	129 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	NSMAF	Q92636	917 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	GCDH	Q92947	438 aa	Predicted RBP	12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	TSPAN32	Q96QS1	320 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	SIKE1	Q9BRV8	207 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	PCDHAC1	Q9H158	963 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	NANOG	Q9H9S0	305 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	SIAE	Q9HAT2	523 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	MRGBP	Q9NV56	204 aa		12.55	□□□□□ -0.4
TARDBP-231	ENST00000639599	IGLV3-9	A0A075B6K5	115 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	C5orf49	A4QMS7	147 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	WNT9B	O14905	357 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	SPRY3	O43610	288 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	RP2	O75695	350 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	OR5F1	O95221	314 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	VENTX	O95231	258 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	STOM	P27105	288 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	AQP2	P41181	271 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	CRYBB2	P43320	205 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	ARHGDIA	P52565	204 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	UGT2B15	P54855	530 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	RUNX1T1	Q06455	604 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	TAF11	Q15544	211 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	PABPC1L2A	Q5JQF8	200 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	DCAF12L2	Q5VW00	463 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	ARL9	Q6T311	187 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	ZNF771	Q7L3S4	317 aa	Predicted RBP	12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	RETREG3	Q86VR2	466 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	BPIFB2	Q8N4F0	458 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	C3orf56	Q8N813	242 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	OR4D11	Q8NGI4	311 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	ST7L	Q8TDW4	575 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	TMEM255B	Q8WV15	326 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	TMEM239	Q8WW34	195 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	STON2	Q8WXE9	905 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	ASB10	Q8WXI3	467 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	CCL17	Q92583	94 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	ZMYND19	Q96E35	227 aa	Predicted RBP	12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	MAGEB18	Q96M61	343 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	RBP7	Q96R05	134 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	RBM4	Q9BWF3	364 aa	Known RBP	12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	SUCNR1	Q9BXA5	334 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	RACGAP1	Q9H0H5	632 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	CYSLTR2	Q9NS75	346 aa		12.54	□□□□□ -0.4
TARDBP-231	ENST00000639599	MALRD1	Q5VYJ5	2156 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	LOC105371242	A0A075B767	164 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599		J3QLI3	93 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	SLC2A10	O95528	541 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	THY1	P04216	161 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	LIPA	P38571	399 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	PCBD1	P61457	104 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	LMO4	P61968	165 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	MRPS34	P82930	218 aa	Known RBP	12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	MAPRE2	Q15555	327 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	LRRC23	Q53EV4	343 aa	Predicted RBP	12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	ALG10	Q5BKT4	473 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	SPATA46	Q5T0L3	261 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	ERICH5	Q6P6B1	374 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	C1orf174	Q8IYL3	243 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	NANP	Q8TBE9	248 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	FNDC8	Q8TC99	324 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	ZNF426	Q9BUY5	554 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	SMURF2	Q9HAU4	748 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	UBAP1	Q9NZ09	502 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	WIPI2	Q9Y4P8	454 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599	MXRA5	Q9NR99	2828 aa		12.53	□□□□□ -0.4
TARDBP-231	ENST00000639599		A0A1W2PPL8	197 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	LYPD3	O95274	346 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	IGHV3-13	P01766	116 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	ZNF32	P17041	273 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	CFP	P27918	469 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	CDA	P32320	146 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	LIMS1	P48059	325 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	ERVK-25	P63136	954 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	TTMP	Q5BVD1	217 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	C10orf128	Q5T292	105 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	METTL21C	Q5VZV1	264 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	RBMS3	Q6XE24	437 aa	Known RBP	12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	ZER1	Q7Z7L7	766 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	NKAIN4	Q8IVV8	208 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	SEMA6D	Q8NFY4	1073 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	OR8J3	Q8NGG0	315 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	AKR7L	Q8NHP1	331 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	ABHD4	Q8TB40	342 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	TPD52L3	Q96J77	140 aa		12.52	□□□□□ -0.41
TARDBP-231	ENST00000639599	PRSS27	Q9BQR3	290 aa		12.52	□□□□□ -0.41

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