RNA–Protein interactions for RNA: ENST00000636853.1

CLN3-251, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 2,289 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-251ENST00000636853 FADS6Q8N9I5 356 aa14.02□□□□□ -0.17
CLN3-251ENST00000636853 OR51A4Q8NGJ6 313 aa14.02□□□□□ -0.17
CLN3-251ENST00000636853 M1APQ8TC57 530 aa14.02□□□□□ -0.17
CLN3-251ENST00000636853 OR5B2Q96R09 309 aa14.02□□□□□ -0.17
CLN3-251ENST00000636853 TMEM246Q9BRR3 403 aa14.02□□□□□ -0.17
CLN3-251ENST00000636853 GON7Q9BXV9 100 aa14.02□□□□□ -0.17
CLN3-251ENST00000636853 AKAP7Q9P0M2 348 aaPredicted RBP14.02□□□□□ -0.17
CLN3-251ENST00000636853 TEKT2Q9UIF3 430 aa14.02□□□□□ -0.17
CLN3-251ENST00000636853 BDP1A6H8Y1 2624 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 G3V3Y1 287 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 LANCL1O43813 399 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 CCL3P10147 92 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 RBMS1P29558 406 aaKnown RBP14.01□□□□□ -0.17
CLN3-251ENST00000636853 SFTPDP35247 375 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 KIR2DL3P43628 341 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 PITPNBP48739 271 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 BLVRAP53004 296 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 MRPL28Q13084 256 aaKnown RBP14.01□□□□□ -0.17
CLN3-251ENST00000636853 EIF2B1Q14232 305 aaKnown RBP14.01□□□□□ -0.17
CLN3-251ENST00000636853 SLC17A1Q14916 467 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 ZNF528Q3MIS6 628 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 Q499Y3 187 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 C3orf33Q6P1S2 294 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 OPN5Q6U736 354 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 ESPNLQ6ZVH7 1005 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 GLCCI1Q86VQ1 547 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 ZNF671Q8TAW3 534 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 ABHD1Q96SE0 405 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 KCNK17Q96T54 332 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 MFRPQ9BY79 579 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 HDHD2Q9H0R4 259 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 ABRACLQ9P1F3 81 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 B3GALT5Q9Y2C3 310 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 RPH3AQ9Y2J0 694 aaPredicted RBP14.01□□□□□ -0.17
CLN3-251ENST00000636853 KIR3DL2P43630 455 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 INPP1P49441 399 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 MAP2K6P52564 334 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 BIDP55957 195 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 SDK2Q58EX2 2172 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 WDR38Q5JTN6 314 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 NDUFAF7Q7L592 441 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 ZNF679Q8IYX0 411 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 LGALS14Q8TCE9 139 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 PPP1R14AQ96A00 147 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 C4orf45Q96LM5 186 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 KCNJ15Q99712 375 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 WACQ9BTA9 647 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 ABHD6Q9BV23 337 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 COMMD4Q9H0A8 199 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 PTGES2Q9H7Z7 377 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 DIABLOQ9NR28 239 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 B3GAT1Q9P2W7 334 aa14.01□□□□□ -0.17
CLN3-251ENST00000636853 TRABD2BA6NFA1 517 aa14□□□□□ -0.17
CLN3-251ENST00000636853 A6NL46 340 aa14□□□□□ -0.17
CLN3-251ENST00000636853 PNPP00491 289 aa14□□□□□ -0.17
CLN3-251ENST00000636853 OTX2P32243 289 aa14□□□□□ -0.17
CLN3-251ENST00000636853 MAP2K3P46734 347 aa14□□□□□ -0.17
CLN3-251ENST00000636853 FAM209AQ5JX71 171 aa14□□□□□ -0.17
CLN3-251ENST00000636853 ZNF57Q68EA5 555 aaPredicted RBP14□□□□□ -0.17
CLN3-251ENST00000636853 OR7E24Q6IFN5 339 aa14□□□□□ -0.17
CLN3-251ENST00000636853 TIPARPQ7Z3E1 657 aaKnown RBP14□□□□□ -0.17
CLN3-251ENST00000636853 KRT77Q7Z794 578 aa14□□□□□ -0.17
CLN3-251ENST00000636853 NOXA1Q86UR1 476 aa14□□□□□ -0.17
CLN3-251ENST00000636853 RPS19BP1Q86WX3 136 aaKnown RBP14□□□□□ -0.17
CLN3-251ENST00000636853 ENKURQ8TC29 256 aa14□□□□□ -0.17
CLN3-251ENST00000636853 HAVCR2Q8TDQ0 301 aa14□□□□□ -0.17
CLN3-251ENST00000636853 ASB17Q8WXJ9 295 aa14□□□□□ -0.17
CLN3-251ENST00000636853 DCBLD2Q96PD2 775 aa14□□□□□ -0.17
CLN3-251ENST00000636853 PISDQ9UG56 409 aa14□□□□□ -0.17
CLN3-251ENST00000636853 PADI1Q9ULC6 663 aa14□□□□□ -0.17
CLN3-251ENST00000636853 GTF2A1LQ9UNN4 478 aa14□□□□□ -0.17
CLN3-251ENST00000636853 TRBV5-5A0A0J9YX44 114 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 MEIOCA2RUB1 952 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 TMEM212A6NML5 194 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 TPD52L2O43399 206 aaKnown RBP13.99□□□□□ -0.17
CLN3-251ENST00000636853 RAD1O60671 282 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 TCN2P20062 427 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 SSR4P51571 173 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 CLDN12P56749 244 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 TBRG1Q3YBR2 411 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 STAC2Q6ZMT1 411 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 PLCZ1Q86YW0 608 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 TMEM156Q8N614 296 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 SLC26A10Q8NG04 563 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 SLC7A6Q92536 515 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 FRMD6Q96NE9 622 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 GNRHR2Q96P88 292 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 TCF7L1Q9HCS4 588 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 SLC22A13Q9Y226 551 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 MRPS7Q9Y2R9 242 aaKnown RBP13.99□□□□□ -0.17
CLN3-251ENST00000636853 R4GN57 208 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 IFITM5A6NNB3 132 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 ZNF814B7Z6K7 855 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 PDCD5O14737 125 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 LYRM1O43325 122 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 SLC43A1O75387 559 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 ZNF823P16415 610 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 KLK2P20151 261 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 PTGS2P35354 604 aa13.99□□□□□ -0.17
CLN3-251ENST00000636853 GALK2Q01415 458 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms