RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 SNRPD2P62316 118 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SHC2P98077 582 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF813Q6ZN06 617 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 UBALD2Q8IYN6 164 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 FBXL6Q8N531 539 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM217Q8N7C4 229 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 OR5D18Q8NGL1 313 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TXNIPQ9H3M7 391 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 DMAC2Q9NW81 257 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 KCNG2Q9UJ96 466 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PITPNC1Q9UKF7 332 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 UFC1Q9Y3C8 167 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 C9JVG2 144 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 JTBO76095 146 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 CALCRP30988 508 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 WDR4P57081 412 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PAX5Q02548 391 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 EBPQ15125 230 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 FAM57BQ71RH2 274 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 C10orf82Q8WW14 230 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 GPX7Q96SL4 187 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 JAM3Q9BX67 310 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 C12orf10Q9HB07 376 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ATP23Q9Y6H3 246 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM269A0A1B0GVZ9 245 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 HLA-DQB2P05538 268 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 NQO2P16083 231 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SSTR4P31391 388 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 RPS16P62249 146 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF85Q03923 595 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 AESQ08117 197 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 EDDM3AQ14507 147 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TGIF2LYQ8IUE0 185 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 BVESQ8NE79 360 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 OLIG1Q8TAK6 271 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 TFAP2CQ92754 450 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 NEIL1Q96FI4 390 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SIRT5Q9NXA8 310 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SPHK1Q9NYA1 384 aa5.58□□□□□ -1.52
SCN1A-212ENST00000636194 PHRF1Q9P1Y6 1649 aaKnown RBP5.58□□□□□ -1.52
SCN1A-212ENST00000636194 SERPINE3A8MV23 424 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 IL2RAP01589 272 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 AKR1C3P42330 323 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 GATMP50440 423 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 GPR18Q14330 331 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PRAMEF5Q5TYX0 476 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PRAMEF6Q5VXH4 476 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ERMP1Q7Z2K6 904 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF516Q92618 1163 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 RAB8BQ92930 207 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 MRPS24Q96EL2 167 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 LGALS13Q9UHV8 139 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 A6NDN8 102 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 LYRM1O43325 122 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SLC25A5P05141 298 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CCL5P13501 91 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 HTN1P15515 57 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 MTNR1BP49286 362 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CYB561P49447 251 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 GZMKP49863 264 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 STC1P52823 247 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 DCDP81605 110 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 C15orf52Q6ZUT6 534 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PRSS48Q7RTY5 328 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 KLHDC8AQ8IYD2 350 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 FRMD1Q8N878 549 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ACVR1CQ8NER5 493 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ADAMTS14Q8WXS8 1223 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 TTC9Q92623 222 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 KCTD12Q96CX2 325 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 MOGAT1Q96PD6 335 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 WDR13Q9H1Z4 485 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 OR6C2Q9NZP2 312 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 RGS13O14921 159 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PPP1R3DO95685 299 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 DRD5P21918 477 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 IRS1P35568 1242 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 LGALS7P47929 136 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 LTBQ06643 244 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 PPP1R8Q12972 351 aaKnown RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SEMA3BQ13214 749 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 KCNAB1Q14722 419 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SSX1Q16384 188 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SFRP4Q6FHJ7 346 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CMTM8Q8IZV2 173 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 OR5M8Q8NGP6 311 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 YIPF5Q969M3 257 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 FAHD2AQ96GK7 314 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 FBXL18Q96ME1 805 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 SLC22A12Q96S37 553 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 MARCH4Q9P2E8 410 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ONECUT1Q9UBC0 465 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 AK3Q9UIJ7 227 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF835Q9Y2P0 537 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 LRRK1Q38SD2 2015 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 NCOA6Q14686 2063 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-212ENST00000636194 A0A1W2PN81 502 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CHRNA7P36544 502 aa5.57□□□□□ -1.52
SCN1A-212ENST00000636194 CXCL12P48061 93 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms