RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PRAMEF17Q5VTA0 474 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 PRSS41Q7RTY9 318 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 DPY19L4Q7Z388 723 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 GTPBP8Q8N3Z3 284 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 GALNT16Q8N428 558 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 OR5T3Q8NGG3 340 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 STOML3Q8TAV4 291 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 VSTM2LQ96N03 204 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 PRRT1Q99946 306 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 SLC17A9Q9BYT1 436 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 ULBP3Q9BZM4 244 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 SERGEFQ9UGK8 458 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 TP53BP1Q12888 1972 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 PRSS44E7EML9 344 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 SULT2B1O00204 365 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 SCAMP1O15126 338 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 RAD1O60671 282 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 S1PR1P21453 382 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 RAB38P57729 211 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 CCINQ13939 588 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 NR0B2Q15466 257 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 WDR38Q5JTN6 314 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 WBP2NLQ6ICG8 309 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 TMEM88Q6PEY1 159 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 LYG2Q86SG7 212 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 LINC00469Q8N7U9 141 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 SLC41A2Q96JW4 573 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 FGF22Q9HCT0 170 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 SLC2A8Q9NY64 477 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 CPNE7Q9UBL6 633 aa13.4□□□□□ -0.26
CACNA1A-220ENST00000635988 PRSS38A1L453 326 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 AKR7A3O95154 331 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 IFNA4P05014 189 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 HTR2CP28335 458 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 TACR3P29371 465 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ATP1B3P54709 279 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ALG11Q2TAA5 492 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 EEF1A1P5Q5VTE0 462 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 SLC25A42Q86VD7 318 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 RCBTB1Q8NDN9 531 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ASB17Q8WXJ9 295 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 HERVK_113Q902F9 699 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 PHB2Q99623 299 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 TWSG1Q9GZX9 223 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 FBXO4Q9UKT5 387 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 A0A1W2PQU0 124 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 DCTN6O00399 190 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 DOK2O60496 412 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 CD2P06729 351 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 FBXO45P0C2W1 286 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 TPT1P13693 172 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ZBTB25P24278 435 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 CAPZA1P52907 286 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 BLOC1S1P78537 153 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 NAAAQ02083 359 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ELOCQ15369 112 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 GUCA2BQ16661 112 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ODF4Q2M2E3 257 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 PRRT3Q5FWE3 981 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 BEX5Q5H9J7 111 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 FAHD2BQ6P2I3 314 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 DGAT2L6Q6ZPD8 337 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ZDHHC22Q8N966 263 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 OTOSQ8NHW6 89 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF707Q96C28 371 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 FAHD2AQ96GK7 314 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 SEC22AQ96IW7 307 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 DEFB118Q96PH6 123 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 CTSFQ9UBX1 484 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 MSRAQ9UJ68 235 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 PCOLCE2Q9UKZ9 415 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 MKL2Q9ULH7 1088 aa13.39□□□□□ -0.27
CACNA1A-220ENST00000635988 MEGF11A6BM72 1044 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 C4orf47A7E2U8 309 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 EML2O95834 649 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 IL2RAP01589 272 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ASAH2BP0C7U1 165 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 MPZP25189 248 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ADAM8P78325 824 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 NOGQ13253 232 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 GPR18Q14330 331 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ATXN7L3Q14CW9 347 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF528Q3MIS6 628 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 SCGB2B2Q4G0G5 96 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 RNF44Q7L0R7 432 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 ZNF584Q8IVC4 421 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 OR13C8Q8NGS7 320 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 MITD1Q8WV92 249 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 RNF141Q8WVD5 230 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 OR8B4Q96RC9 309 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 LMF1Q96S06 567 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 KCNK15Q9H427 330 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 TMEM100Q9NV29 134 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 DHDHQ9UQ10 334 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 PLEKHA6Q9Y2H5 1048 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 COL4A2P08572 1712 aa13.38□□□□□ -0.27
CACNA1A-220ENST00000635988 MEOX2P50222 304 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms