RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 AKAIN1P0CW23 69 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 FSTP19883 344 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 CD38P28907 300 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 CCKBRP32239 447 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 NR0B1P51843 470 aaKnown RBP11.5□□□□□ -0.57
LINC00540-203ENST00000631321 PNLIPRP2P54317 469 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 RAB14P61106 215 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 PLCXD2Q0VAA5 305 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 ODF4Q2M2E3 257 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 C2orf76Q3KRA6 126 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 HLA-DQA1Q5Y7H0 255 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 IDO2Q6ZQW0 420 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 SLC35D2Q76EJ3 337 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 BPHLQ86WA6 291 aaPredicted RBP11.5□□□□□ -0.57
LINC00540-203ENST00000631321 CARFQ8N187 725 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 RLN3Q8WXF3 142 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 DAZLQ92904 295 aaKnown RBP11.5□□□□□ -0.57
LINC00540-203ENST00000631321 SLC25A28Q96A46 364 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 ELMOD3Q96FG2 381 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 TBL1XR1Q9BZK7 514 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 CDCP1Q9H5V8 836 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 SLC22A13Q9Y226 551 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 TMED7Q9Y3B3 224 aa11.5□□□□□ -0.57
LINC00540-203ENST00000631321 TDRD6O60522 2096 aaKnown RBP11.49□□□□□ -0.57
LINC00540-203ENST00000631321 SLC22A23A1A5C7 686 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 A8MVM7 634 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 PLPP3O14495 311 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 SLC16A7O60669 478 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 ZNF217O75362 1048 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 MELTFP08582 738 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
LINC00540-203ENST00000631321 NFYAP23511 347 aaPredicted RBP11.49□□□□□ -0.57
LINC00540-203ENST00000631321 ZP2Q05996 745 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 AANATQ16613 207 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 NHLRC3Q5JS37 347 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 C1orf140Q5VVS0 124 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 CATSPERDQ86XM0 798 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 ADGRG3Q86Y34 549 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 ZNF454Q8N9F8 522 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 CLEC1AQ8NC01 280 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 STK35Q8TDR2 534 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 GPR119Q8TDV5 335 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 GPX8Q8TED1 209 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 PNPLA2Q96AD5 504 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 SLC25A36Q96CQ1 311 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 OMA1Q96E52 524 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 SFXN2Q96NB2 322 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 GINS4Q9BRT9 223 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 SEMA4CQ9C0C4 833 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 CDV3Q9UKY7 258 aaKnown RBP11.49□□□□□ -0.57
LINC00540-203ENST00000631321 PPIEQ9UNP9 301 aaKnown RBP11.49□□□□□ -0.57
LINC00540-203ENST00000631321 TRAV18A0A075B6X5 111 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 TMEM272A0A1B0GTI8 110 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 A0A1W2PPL8 197 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 UBE2QL1A1L167 161 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 CDC14CA4D256 554 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 OR6C76A6NM76 312 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 HMSDA8MTL9 139 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 LMO7DNF2Z398 122 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 SULT1C2O00338 296 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 GMFGO60234 142 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 FADS1O60427 444 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 RGS11O94810 467 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 KDM4BO94953 1096 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 HLA-DQA2P01906 255 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 CTLA4P16410 223 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 ABCD3P28288 659 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 PRSS3P35030 304 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 C14orf28Q4W4Y0 310 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 TMEM225Q6GV28 225 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 OR5M10Q6IEU7 315 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 KCTD18Q6PI47 426 aaPredicted RBP11.49□□□□□ -0.57
LINC00540-203ENST00000631321 POMZP3Q6PJE2 187 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 OR4D10Q8NGI6 311 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 OR52B4Q8NGK2 314 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 OR1N1Q8NGS0 311 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 ASB5Q8WWX0 329 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 OPN4Q9UHM6 478 aa11.49□□□□□ -0.57
LINC00540-203ENST00000631321 ZSCAN5BA6NJL1 495 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 METTL12A8MUP2 240 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 L7N2F9 121 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 ADAM10O14672 748 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 SRSF10O75494 262 aaKnown RBP11.48□□□□□ -0.57
LINC00540-203ENST00000631321 OR6A2O95222 327 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 WNT11O96014 354 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 SPARCP09486 303 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 PPM1FP49593 454 aaPredicted RBP11.48□□□□□ -0.57
LINC00540-203ENST00000631321 RIDAP52758 137 aaKnown RBP11.48□□□□□ -0.57
LINC00540-203ENST00000631321 HSD11B2P80365 405 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 GUCA2AQ02747 115 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 MFGE8Q08431 387 aaPredicted RBP11.48□□□□□ -0.57
LINC00540-203ENST00000631321 MPPED2Q15777 294 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 C5orf46Q6UWT4 87 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 NHLRC1Q6VVB1 395 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 C3P1Q6ZMU1 363 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 GRINAQ7Z429 371 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 TSTD1Q8NFU3 115 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 OR1J4Q8NGS1 313 aa11.48□□□□□ -0.57
LINC00540-203ENST00000631321 OR6S1Q8NH40 331 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms