RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 Q6ZSR9 355 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM135Q86UB9 458 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MREGQ8N565 214 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TERB1Q8NA31 727 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM161BQ8NDZ6 487 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 VN1R2Q8NFZ6 395 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR11H1Q8NG94 326 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR5L2Q8NGL0 311 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR5L1Q8NGL2 311 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR2T11Q8NH01 316 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR11H2Q8NH07 326 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR5P2Q8WZ92 322 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ZBTB8AQ96BR9 441 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM19Q96HH6 336 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 FAM46AQ96IP4 442 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ITCHQ96J02 903 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 Q96MT0 163 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TRPM7Q96QT4 1865 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SLC6A7Q99884 636 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 GATA5Q9BWX5 397 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 CDCA4Q9BXL8 241 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SLC19A3Q9BZV2 496 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TUBB1Q9H4B7 451 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF665Q9H7R5 613 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 BEX1Q9HBH7 125 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SDHAF2Q9NX18 166 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ST6GALNAC2Q9UJ37 374 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MGAT4AQ9UM21 535 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TCF19Q9Y242 345 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 FARSAQ9Y285 508 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TP53TG5Q9Y2B4 290 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MAP2P11137 1827 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 PALLDQ8WX93 1383 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 PVALEFA0A1B0GWK0 134 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ASPDHA6ND91 283 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 CXorf65A6NEN9 183 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 G3V4G9 280 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TMX2-CTNND1H3BSU7 103 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OVOL3O00110 214 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 UBDO15205 165 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 CHP2O43745 196 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 EIF4E2O60573 245 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 CNIH1O95406 144 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TTLL1O95922 423 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OXTP01178 125 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 C8BP07358 591 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR8U9P0C7N5 309 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SLC35G4P0C7Q5 338 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MGMTP16455 207 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 GPX3P22352 226 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SLC6A1P30531 599 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ADMP35318 185 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 TNFSF9P41273 254 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 QARSP47897 775 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MEOX2P50222 304 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR10A3P58181 314 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 CD81P60033 236 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 RHOAP61586 193 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SUMO2P61956 95 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 RPS6P62753 249 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ELAVL2Q12926 359 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SKP2Q13309 424 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 GPR50Q13585 617 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MEF2DQ14814 521 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 POU6F1Q14863 301 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ATP6V1FQ16864 119 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 DMRTC1Q5HYR2 192 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 Q6ZS46 218 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 NET1Q7Z628 596 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 THOC6Q86W42 341 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MMD2Q8IY49 270 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 MS4A15Q8N5U1 240 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 IQCF1Q8N6M8 205 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 PRR26Q8N8Z3 221 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SCCPDHQ8NBX0 429 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SEMA6DQ8NFY4 1073 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR10K1Q8NGX5 313 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR51A7Q8NH64 312 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 LYPD6BQ8NI32 183 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 ACER1Q8TDN7 264 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SMAP2Q8WU79 429 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 OR8D1Q8WZ84 308 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 EXOSC8Q96B26 276 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 SLC25A51Q9H1U9 297 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 PPA2Q9H2U2 334 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 BOLA2Q9H3K6 86 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 DHX35Q9H5Z1 703 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 DDX31Q9H8H2 851 aaKnown RBP4.28□□□□□ -1.72
SDCBP-213ENST00000630925 POLD4Q9HCU8 107 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 RETNQ9HD89 108 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 GDF3Q9NR23 364 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 CLN6Q9NWW5 311 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 RNF186Q9NXI6 227 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 COA4Q9NYJ1 87 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 PRELID3BQ9Y3B1 194 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 GOLT1BQ9Y3E0 138 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 LOXL2Q9Y4K0 774 aa4.28□□□□□ -1.72
SDCBP-213ENST00000630925 EYSQ5T1H1 3165 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 PQLC2LA1A4F0 135 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms