RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 SLC36A2Q495M3 483 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 NRN1LQ496H8 165 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 THEM4Q5T1C6 240 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 FAM205BPQ63HN1 556 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 THSD4Q6ZMP0 1018 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 NABP1Q96AH0 204 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
PNKP-223ENST00000629179 REG4Q9BYZ8 158 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 PLK3Q9H4B4 646 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 ZNF442Q9H7R0 627 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 SIAEQ9HAT2 523 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 IL1RAPQ9NPH3 570 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 GRHPRQ9UBQ7 328 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 IL20RAQ9UHF4 553 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 FBXL3Q9UKT7 428 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 ABCA2Q9BZC7 2435 aa12.27□□□□□ -0.45
PNKP-223ENST00000629179 ZFHX3Q15911 3703 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 NF1P21359 2839 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 VSTM5A8MXK1 200 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 GPRIN2O60269 458 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 NDUFB2O95178 105 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 MMP7P09237 267 aaPredicted RBP12.26□□□□□ -0.45
PNKP-223ENST00000629179 NR2C1P13056 603 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 CCL2P13500 99 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 EFNA4P52798 201 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 FXYD6P3P58550 94 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 SNRPD2P62316 118 aaKnown RBP12.26□□□□□ -0.45
PNKP-223ENST00000629179 MS4A2Q01362 244 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 TRIM25Q14258 630 aaKnown RBP12.26□□□□□ -0.45
PNKP-223ENST00000629179 EFNB3Q15768 340 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 FAM122BQ7Z309 247 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 DPPA2Q7Z7J5 298 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 ZER1Q7Z7L7 766 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 DHFR2Q86XF0 187 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 ARHGAP24Q8N264 748 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 SVOPLQ8N434 492 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 PAQR4Q8N4S7 273 aaPredicted RBP12.26□□□□□ -0.45
PNKP-223ENST00000629179 SLC30A7Q8NEW0 376 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 BCAS4Q8TDM0 211 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 RASD2Q96D21 266 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 SORCS2Q96PQ0 1159 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 VRK1Q99986 396 aaPredicted RBP12.26□□□□□ -0.45
PNKP-223ENST00000629179 RHNO1Q9BSD3 238 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 TAS2R1Q9NYW7 299 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 SPEF1Q9Y4P9 236 aa12.26□□□□□ -0.45
PNKP-223ENST00000629179 IGHV4-30-2A0A087WSY4 118 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 TEX13CA0A0J9YWL9 993 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 A0A1W2PPL8 197 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 TCRBV5S2A0A599 114 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 SLC22A23A1A5C7 686 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 F12P00748 615 aaPredicted RBP12.25□□□□□ -0.45
PNKP-223ENST00000629179 APEX1P27695 318 aaKnown RBP12.25□□□□□ -0.45
PNKP-223ENST00000629179 GALK2Q01415 458 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 MESTQ5EB52 335 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 TRPM8Q7Z2W7 1104 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 ZCCHC24Q8N2G6 241 aaKnown RBP12.25□□□□□ -0.45
PNKP-223ENST00000629179 ZNF525Q8N782 197 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 FNDC8Q8TC99 324 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 CLPTM1LQ96KA5 538 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 ZNF570Q96NI8 536 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 DOK1Q99704 481 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 NDEL1Q9GZM8 345 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 KCNN2Q9H2S1 579 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 CCNB1IP1Q9NPC3 277 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 KRCC1Q9NPI7 259 aaPredicted RBP12.25□□□□□ -0.45
PNKP-223ENST00000629179 NRIP3Q9NQ35 241 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 CMAHPQ9Y471 501 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 IER3IP1Q9Y5U9 82 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 MALRD1Q5VYJ5 2156 aa12.25□□□□□ -0.45
PNKP-223ENST00000629179 IQCMA0A1B0GVH7 501 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 PRSS37A4D1T9 235 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 FAM171A2A8MVW0 826 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 XKRYO14609 159 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 IMPA2O14732 288 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 MGRN1O60291 552 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 OR10H3O60404 316 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 SCG5P05408 212 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 HEXAP06865 529 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 ZNF32P17041 273 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 LAP3P28838 519 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 GLRXP35754 106 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 HSF2Q03933 536 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 PLP2Q04941 152 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 KRR1Q13601 381 aaKnown RBP12.24□□□□□ -0.45
PNKP-223ENST00000629179 MTX3Q5HYI7 312 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 PABPC1L2AQ5JQF8 200 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 FAM27BQ5VT28 67 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 LCN8Q6JVE9 175 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 CLEC2AQ6UVW9 174 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 FOXL2NBQ6ZUU3 175 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 CPEB3Q8NE35 698 aaKnown RBP12.24□□□□□ -0.45
PNKP-223ENST00000629179 OR10H5Q8NGA6 315 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 AKR7LQ8NHP1 331 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 MRPL24Q96A35 216 aaKnown RBP12.24□□□□□ -0.45
PNKP-223ENST00000629179 FOXN4Q96NZ1 517 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 GPX7Q96SL4 187 aaPredicted RBP12.24□□□□□ -0.45
PNKP-223ENST00000629179 MRPL37Q9BZE1 423 aaKnown RBP12.24□□□□□ -0.45
PNKP-223ENST00000629179 C1orf21Q9H246 121 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms