RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OXGR1Q96P68 337 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 NAA11Q9BSU3 229 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SRXN1Q9BYN0 137 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 OR51E2Q9H255 320 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 RERGLQ9H628 205 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 RNF167Q9H6Y7 350 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 KLHL13Q9P2N7 655 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 COPS3Q9UNS2 423 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 RASD1Q9Y272 281 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SF3B6Q9Y3B4 125 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 CRYBG3Q68DQ2 2970 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 IGKV1D-43A0A0B4J1Z2 117 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 LOC102725191A0A1B0GVB3 256 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC22A23A1A5C7 686 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TNFSF11O14788 317 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 DNPH1O43598 174 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 AKAP8O43823 692 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZG16O60844 167 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 VAMP5O95183 116 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 CRYABP02511 175 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 HPNP05981 417 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 CPEP16870 476 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF182P17025 639 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 POU3F2P20265 443 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 CRABP1P29762 137 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 CENPAP49450 140 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 MEOX1P50221 254 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 BLVRAP53004 296 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 VBP1P61758 197 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 LSM3P62310 102 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ACSM1Q08AH1 577 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ETFDHQ16134 617 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF766Q5HY98 468 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ESPNLQ6ZVH7 1005 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 MCEMP1Q8IX19 187 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC35F2Q8IXU6 374 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 NDNFQ8TB73 568 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SPRYD4Q8WW59 207 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 UFD1Q92890 307 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 MRPL48Q96GC5 212 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 UCN2Q96RP3 112 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 MYCBPQ99417 103 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 DCUN1D5Q9BTE7 237 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 MRPL13Q9BYD1 178 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 TSPAN10Q9H1Z9 355 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 MARCH7Q9H992 704 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 NDUFB11Q9NX14 153 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 KLHDC2Q9Y2U9 406 aa8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 SIRT4Q9Y6E7 314 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-223ENST00000627587 ABCA12Q86UK0 2595 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 LRBAP50851 2863 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 CACNA1CQ13936 2221 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 IGHV3-15A0A0B4J1V0 119 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 FAM166BA8MTA8 275 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 E9PI62 339 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 EIF1AYO14602 144 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 MAGEB4O15481 346 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 AHCYL1O43865 530 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC16A7O60669 478 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 GPX5O75715 221 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 MT-ND5P03915 603 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 PSMA1P25786 263 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 CRYBB2P43320 205 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 MAGEA5P43359 124 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 CAPZA2P47755 286 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 STARP49675 285 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 TNFSF10P50591 281 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 BIDP55957 195 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 RAC3P60763 192 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 ACTA2P62736 377 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 ACTG2P63267 376 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 RBPJQ06330 500 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 FMODQ06828 376 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 TPBGQ13641 420 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 HYAL4Q2M3T9 481 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 RNFT1Q5M7Z0 435 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF684Q5T5D7 378 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 LIPKQ5VXJ0 399 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 OTPQ5XKR4 325 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 ZNF324BQ6AW86 544 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 HBMQ6B0K9 141 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 DNM1P34Q6PK57 102 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 RPTNQ6XPR3 784 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 TRILQ7L0X0 811 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 SLC22A16Q86VW1 577 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 UBQLNLQ8IYU4 475 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 TMEM251Q8N6I4 163 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 ZFP41Q8N8Y5 198 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 ZFP62Q8NB50 900 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 SYT14Q8NB59 555 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 EMC6Q9BV81 110 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 TTTY10Q9BZA0 68 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 CXorf56Q9H5V9 222 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 WDR76Q9H967 626 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 MRPL22Q9NWU5 206 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 QPCTLQ9NXS2 382 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 B9D1Q9UPM9 204 aa8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 NCOA6Q14686 2063 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-223ENST00000627587 DIDO1Q9BTC0 2240 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms