RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 NRMQ8IXM6 262 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 RNF113BQ8IZP6 322 aaKnown RBP5.55□□□□□ -1.52
TCF4-249ENST00000625716 OFCC1Q8IZS5 231 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 SYT14Q8NB59 555 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 TMEM54Q969K7 222 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 MCUR1Q96AQ8 359 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 RBP7Q96R05 134 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 NELFAQ9H3P2 528 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 CA10Q9NS85 328 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 ERVK13-1Q9NX77 482 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 RHCGQ9UBD6 479 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 CRNNQ9UBG3 495 aaPredicted RBP5.55□□□□□ -1.52
TCF4-249ENST00000625716 ABCD2Q9UBJ2 740 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 A4GNTQ9UNA3 340 aa5.55□□□□□ -1.52
TCF4-249ENST00000625716 PRRC2AP48634 2157 aaKnown RBP5.55□□□□□ -1.52
TCF4-249ENST00000625716 IGHV2OR16-5A0A0B4J2B6 119 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 IQCMA0A1B0GVH7 501 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 A6NIZ1 184 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 CENPBD1B2RD01 187 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 H7C417 338 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 J3KTA2 159 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SHOXO15266 292 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 MGRN1O60291 552 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PIP5K1CO60331 668 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PDE5AO76074 875 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 ZNF205O95201 554 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 LY6G6DO95868 133 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PTHP01270 115 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 IGLV1-44P01699 117 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 HEXAP06865 529 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 H1F0P07305 194 aaKnown RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 CELA3BP08861 270 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 OR4A8P0C604 315 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PGA4P0DJD7 388 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PGA3P0DJD8 388 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 RHCEP18577 417 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 TCN1P20061 433 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 NPR2P20594 1047 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 CALCRP30988 508 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 RPL4P36578 427 aaKnown RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 GIPRP48546 466 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SLC9A3P48764 834 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 EFNA4P52798 201 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SMIM11AP58511 58 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 CTXN1P60606 82 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 RAP1BP61224 184 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 RPS23P62266 143 aaKnown RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 RAP1AP62834 184 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PPP2R2BQ00005 443 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 MYBPC1Q00872 1141 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PLP2Q04941 152 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PRKCDQ05655 676 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 CD47Q08722 323 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SNTB2Q13425 540 aaKnown RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 TNK1Q13470 666 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 TOP3AQ13472 1001 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 SLC36A2Q495M3 483 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 FGD3Q5JSP0 725 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SAMD4BQ5PRF9 694 aaKnown RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 FAM205BPQ63HN1 556 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 C11orf71Q6IPW1 123 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 KRT80Q6KB66 452 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 MBOAT2Q6ZWT7 520 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 Q71RC1 249 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 ZNF627Q7L945 461 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SLC16A14Q7RTX9 510 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SKA3Q8IX90 412 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PGAM4Q8N0Y7 254 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 CIARTQ8N365 385 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 SLC22A24Q8N4F4 322 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 RNF148Q8N7C7 305 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 NOXO1Q8NFA2 376 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 NUP37Q8NFH4 326 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 OR1J2Q8NGS2 313 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 OR51A7Q8NH64 312 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 MOSPD2Q8NHP6 518 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 FNDC8Q8TC99 324 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 LIPHQ8WWY8 451 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 ASB10Q8WXI3 467 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 ACOT11Q8WXI4 607 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 MCHR2Q969V1 340 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 EAF1Q96JC9 268 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 CDRT15Q96T59 188 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 SMR3AQ99954 134 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 VRK1Q99986 396 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 REG4Q9BYZ8 158 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 RAB1BQ9H0U4 201 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 LRMDAQ9H2I8 198 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 TXNIPQ9H3M7 391 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 C1orf198Q9H425 327 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 PLK3Q9H4B4 646 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 ANKRD19PQ9H560 264 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 NMNAT1Q9HAN9 279 aaPredicted RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 DYNLRB1Q9NP97 96 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 C20orf141Q9NUB4 165 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 DCAF13Q9NV06 445 aaKnown RBP5.54□□□□□ -1.52
TCF4-249ENST00000625716 GFOD1Q9NXC2 390 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 B3GNT2Q9NY97 397 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 MAGEL2Q9UJ55 1249 aa5.54□□□□□ -1.52
TCF4-249ENST00000625716 AURKCQ9UQB9 309 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms