RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 DEFB119Q8N690 84 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 PLPP7Q8NBV4 271 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 LMX1AQ8TE12 382 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 FAM3DQ96BQ1 224 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 OR8B4Q96RC9 309 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 C1QTNF6Q9BXI9 259 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 TRIOO75962 3097 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 TRAV36DV7A0A075B6V5 113 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 LOC105371267A0A1B0GV96 52 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 TMEM150CB9EJG8 249 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 ARPC5O15511 151 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 SLC16A7O60669 478 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 SPARCP09486 303 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 IL12BP29460 328 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 FASLGP48023 281 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 SLC6A8P48029 635 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 NR0B1P51843 470 aaKnown RBP10.16□□□□□ -0.78
VARS2-213ENST00000625423 DLX5P56178 289 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 RAB11BQ15907 218 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 ACKR1Q16570 336 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 ASPHD2Q6ICH7 369 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 ZNF721Q8TF20 911 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 GAL3ST1Q99999 423 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 NUDT9Q9BW91 350 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 TMPRSS13Q9BYE2 586 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 TAS2R8Q9NYW2 309 aa10.16□□□□□ -0.78
VARS2-213ENST00000625423 MRTO4Q9UKD2 239 aaKnown RBP10.16□□□□□ -0.78
VARS2-213ENST00000625423 PRSS37A4D1T9 235 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 SUSD5O60279 629 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 SLC25A12O75746 678 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 TPPPO94811 219 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 OR6A2O95222 327 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 DDAH2O95865 285 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 CD3DP04234 171 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 IGKV3-11P04433 115 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 MFSD13AQ14CX5 517 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 PRAMEF17Q5VTA0 474 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 NUP54Q7Z3B4 507 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 MUC20Q8N307 709 aaPredicted RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 OIT3Q8WWZ8 545 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 RBPMSQ93062 196 aaKnown RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 C12orf10Q9HB07 376 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 MRPL22Q9NWU5 206 aaKnown RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 DHCR7Q9UBM7 475 aaKnown RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 OPN4Q9UHM6 478 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 URB1O60287 2271 aaKnown RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 SHISA7A6NL88 538 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 GOSR2O14653 212 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 AKAIN1P0CW23 69 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 ZNF35P13682 527 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 PRSS3P35030 304 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 SEC61A1P61619 476 aaKnown RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 INSM1Q01101 510 aaPredicted RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 ARHGAP40Q5TG30 622 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 OR7E24Q6IFN5 339 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 MAMDC2Q7Z304 686 aaPredicted RBP10.15□□□□□ -0.78
VARS2-213ENST00000625423 MDGA2Q7Z553 956 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 GLRX5Q86SX6 157 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 ZNF679Q8IYX0 411 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 PNPLA2Q96AD5 504 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 PTDSS2Q9BVG9 487 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 CHST6Q9GZX3 395 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 ATG5Q9H1Y0 275 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 CUTCQ9NTM9 273 aa10.15□□□□□ -0.78
VARS2-213ENST00000625423 LOC100289279A0A1B0GTE1 492 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 TMEM272A0A1B0GTI8 110 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 HSPB2A8KAH6 182 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 SLC17A2O00624 439 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 CDC40O60508 579 aaKnown RBP eCLIP10.15□□□□□ -0.79
VARS2-213ENST00000625423 WNT11O96014 354 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 CSF2RBP32927 897 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 EFNA3P52797 238 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 RPL27P61353 136 aaKnown RBP10.15□□□□□ -0.79
VARS2-213ENST00000625423 MFGE8Q08431 387 aaPredicted RBP10.15□□□□□ -0.79
VARS2-213ENST00000625423 HLXQ14774 488 aaPredicted RBP10.15□□□□□ -0.79
VARS2-213ENST00000625423 HSPB2Q16082 182 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 DCAF12L2Q5VW00 463 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 SLC18B1Q6NT16 456 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 NDUFAF7Q7L592 441 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 C9orf40Q8IXQ3 194 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 PRSS58Q8IYP2 241 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 OR2AK2Q8NG84 335 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 OR6N1Q8NGY5 312 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 RNF128Q8TEB7 428 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 TMEM131Q92545 1883 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 TMEM138Q9NPI0 162 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 KIF25Q9UIL4 384 aa10.15□□□□□ -0.79
VARS2-213ENST00000625423 FXYD6-FXYD2A0A087WZ82 144 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 FITM1A5D6W6 292 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 DOK2O60496 412 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 ACSM4P0C7M7 580 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 CTLA4P16410 223 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 ADAM8P78325 824 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 ELOCQ15369 112 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 FDX2Q6P4F2 183 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 KRT77Q7Z794 578 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 ADGRG3Q86Y34 549 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 OR1J4Q8NGS1 313 aa10.14□□□□□ -0.79
VARS2-213ENST00000625423 TBL1XR1Q9BZK7 514 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms