RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 CCNHP51946 323 aaPredicted RBP2.54□□□□□ -2
CDKL5-207ENST00000624700 LINC00315P59091 139 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 ERCC8Q13216 396 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 MADCAM1Q13477 382 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 PON3Q15166 354 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 POU2AF1Q16633 256 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 MAJINQ3KP22 176 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 NANOGP8Q6NSW7 305 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 BHLHA15Q7RTS1 189 aaPredicted RBP2.54□□□□□ -2
CDKL5-207ENST00000624700 PGAM4Q8N0Y7 254 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 FAM86B1Q8N7N1 296 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 NOXO1Q8NFA2 376 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 OR7G2Q8NG99 324 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 OR10R2Q8NGX6 335 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 UBALD1Q8TB05 177 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 FAM3DQ96BQ1 224 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 RASD2Q96D21 266 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 SEH1LQ96EE3 360 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 CNDP1Q96KN2 507 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 ZNF578Q96N58 590 aaPredicted RBP2.54□□□□□ -2
CDKL5-207ENST00000624700 CENPKQ9BS16 269 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 METTL7AQ9H8H3 244 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 NECAP2Q9NVZ3 263 aa2.54□□□□□ -2
CDKL5-207ENST00000624700 UXTQ9UBK9 157 aaPredicted RBP2.54□□□□□ -2
CDKL5-207ENST00000624700 SLIT3O75094 1523 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 IGLV1-50A0A075B6I6 118 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 IGHV3-74A0A0B4J1X5 117 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 A0A1W2PP18 115 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 XKRY2A2RUG3 117 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 CCDC169A6NNP5 214 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 HIDE1A8MVS5 230 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 FOLR1P15328 257 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 F2RP25116 425 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 NAA10P41227 235 aaPredicted RBP2.53□□□□□ -2
CDKL5-207ENST00000624700 NCBP2P52298 156 aaKnown RBP eCLIP2.53□□□□□ -2
CDKL5-207ENST00000624700 VSX2P58304 361 aaPredicted RBP2.53□□□□□ -2
CDKL5-207ENST00000624700 SLAQ13239 276 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 C5orf47Q569G3 176 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 ASCL5Q7RTU5 278 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 SLC22A9Q8IVM8 553 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 PRSS58Q8IYP2 241 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 CYB561D1Q8N8Q1 229 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 N4BP2L2Q92802 583 aaPredicted RBP2.53□□□□□ -2
CDKL5-207ENST00000624700 DNAJC1Q96KC8 554 aaKnown RBP2.53□□□□□ -2
CDKL5-207ENST00000624700 ATP5SQ99766 215 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 SLC25A2Q9BXI2 301 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 HMG20AQ9NP66 347 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 ING4Q9UNL4 249 aa2.53□□□□□ -2
CDKL5-207ENST00000624700 CSDC2Q9Y534 153 aaKnown RBP2.53□□□□□ -2
CDKL5-207ENST00000624700 COL4A4P53420 1690 aaPredicted RBP2.53□□□□□ -2
CDKL5-207ENST00000624700 CIB4A0PJX0 185 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 FAM47DPA6NHR8 397 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 LRRIQ3A6PVS8 624 aaPredicted RBP2.52□□□□□ -2.01
CDKL5-207ENST00000624700 UBXN8O00124 270 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 AIM2O14862 343 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 PPP1R2P9O14990 202 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 ENTPD5O75356 428 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 SNX4O95219 450 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 UTS2O95399 124 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 HLA-DPB1P04440 258 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 ZNF43P17038 809 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 TAGLN2P37802 199 aaKnown RBP2.52□□□□□ -2.01
CDKL5-207ENST00000624700 CEACAM6P40199 344 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 CDKN1BP46527 198 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 CSNK1A1P48729 337 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 NUTF2P61970 127 aaKnown RBP2.52□□□□□ -2.01
CDKL5-207ENST00000624700 LRRC74AQ0VAA2 488 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 SF3A2Q15428 464 aaKnown RBP2.52□□□□□ -2.01
CDKL5-207ENST00000624700 RAET1LQ5VY80 246 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 BIVMQ86UB2 503 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 FAM228AQ86W67 206 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 UBALD2Q8IYN6 164 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 STPG2Q8N412 459 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 MS4A15Q8N5U1 240 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 C15orf56Q8N910 161 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 HSD17B11Q8NBQ5 300 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 OR4C5Q8NGB2 326 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 OR1S2Q8NGQ3 325 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 OR5W2Q8NH69 310 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 AKR7LQ8NHP1 331 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 SERPINB12Q96P63 405 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 SPIN2AQ99865 258 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 SPIN2BQ9BPZ2 258 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 CWH43Q9H720 699 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 TMED5Q9Y3A6 229 aa2.52□□□□□ -2.01
CDKL5-207ENST00000624700 NUP214P35658 2090 aaPredicted RBP2.52□□□□□ -2.01
CDKL5-207ENST00000624700 DOCK9Q9BZ29 2069 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 TMEM150BA6NC51 233 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 C9JVG2 144 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 SRP72O76094 671 aaKnown RBP2.51□□□□□ -2.01
CDKL5-207ENST00000624700 GABARAPO95166 117 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 VAMP5O95183 116 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 AIFM1O95831 613 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 CLIC3O95833 236 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 FABP3P05413 133 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 GNAO1P09471 354 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 CT62P0C5K7 136 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 PRPS2P11908 318 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 RRM2P31350 389 aa2.51□□□□□ -2.01
CDKL5-207ENST00000624700 RFX3P48380 749 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms