RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SDR9C7Q8NEX9 313 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
CBWD3-217ENST00000621474 SNX18Q96RF0 628 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 LIME1Q9H400 295 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 AKAP9Q99996 3911 aa12.47□□□□□ -0.41
CBWD3-217ENST00000621474 DSCAMO60469 2012 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.41
CBWD3-217ENST00000621474 IGHV1-18A0A0C4DH31 117 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 WNT11O96014 354 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 OR8G3PP0DMU2 310 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 CD40P25942 277 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 NOS3P29474 1203 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 ZNF84P51523 738 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 LEG1Q6P5S2 330 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 ZDHHC13Q8IUH4 622 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 ZNF584Q8IVC4 421 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 OR6V1Q8N148 313 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 PARP8Q8N3A8 854 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 SVOPLQ8N434 492 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 FAM169BQ8N8A8 192 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 OR2T33Q8NG76 320 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 LURAP1Q96LR2 239 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 FOXN4Q96NZ1 517 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 ESRP2Q9H6T0 727 aaKnown RBP12.46□□□□□ -0.41
CBWD3-217ENST00000621474 NGBQ9NPG2 151 aa12.46□□□□□ -0.41
CBWD3-217ENST00000621474 TMEFF2Q9UIK5 374 aaPredicted RBP12.46□□□□□ -0.41
CBWD3-217ENST00000621474 ZNF469Q96JG9 3925 aaPredicted RBP12.46□□□□□ -0.42
CBWD3-217ENST00000621474 NAV2Q8IVL1 2488 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 IGLV1-36A0A0B4J1U3 117 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 SHISA9B4DS77 424 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 H3BN98 237 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 M0R1B8 84 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 SLC16A7O60669 478 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-217ENST00000621474 MMP7P09237 267 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-217ENST00000621474 CBR1P16152 277 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 PTAFRP25105 342 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 PPP2R2BQ00005 443 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 PIGFQ07326 219 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.45□□□□□ -0.42
CBWD3-217ENST00000621474 PGGHGQ32M88 737 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 ACSM5Q6NUN0 579 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 ADAM5Q6NVV9 412 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF704Q6ZNC4 412 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-217ENST00000621474 CCDC36Q8IYA8 594 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 LRRC18Q8N456 261 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 KBTBD8Q8NFY9 601 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 ZNRF4Q8WWF5 429 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 NEUROG1Q92886 237 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 SLC38A2Q96QD8 506 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 RBM4Q9BWF3 364 aaKnown RBP12.45□□□□□ -0.42
CBWD3-217ENST00000621474 FN3KQ9H479 309 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 SIAEQ9HAT2 523 aa12.45□□□□□ -0.42
CBWD3-217ENST00000621474 PAPOLBQ9NRJ5 636 aaKnown RBP12.45□□□□□ -0.42
CBWD3-217ENST00000621474 SAC3D1A6NKF1 404 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 ABCD4O14678 606 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 MGRN1O60291 552 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 GPANK1O95872 356 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CECR9P0C854 216 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF14P17017 642 aaPredicted RBP12.44□□□□□ -0.42
CBWD3-217ENST00000621474 EPHA2P29317 976 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CAPZA2P47755 286 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 GIPRP48546 466 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CDK5Q00535 292 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
CBWD3-217ENST00000621474 GSG1Q2KHT4 349 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 C3orf36Q3SXR2 165 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 FAM27BQ5VT28 67 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 OTPQ5XKR4 325 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 FBXW10Q5XX13 1052 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 UGT2A3Q6UWM9 527 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 TMEM108Q6UXF1 575 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 ZBTB46Q86UZ6 589 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 JAZF1Q86VZ6 243 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CYB561A3Q8NBI2 242 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 SLC37A3Q8NCC5 494 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 ICA1LQ8NDH6 482 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 TEX47Q8TBZ9 253 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 DNAJC9Q8WXX5 260 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 MS4A3Q96HJ5 214 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 OSBPL10Q9BXB5 764 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF556Q9HAH1 456 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 RPRD1BQ9NQG5 326 aaKnown RBP12.44□□□□□ -0.42
CBWD3-217ENST00000621474 POLE4Q9NR33 117 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 KIF17Q9P2E2 1029 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 BAIAP2Q9UQB8 552 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 COA3Q9Y2R0 106 aaPredicted RBP12.44□□□□□ -0.42
CBWD3-217ENST00000621474 RNF115Q9Y4L5 304 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 A0A1W2PPL8 197 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 MPZL1O95297 269 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CD3EP07766 207 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 GAAP10253 952 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CD79AP11912 226 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 NPR2P20594 1047 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 POU1F1P28069 291 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 LAP3P28838 519 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CALCRP30988 508 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms