RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZNF443Q9Y2A4 671 aaPredicted RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 KPTNQ9Y664 436 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 SAR1BQ9Y6B6 198 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 FBP2O00757 339 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 FARS2O95363 451 aaKnown RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 DRD4P21917 467 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 GTF2E2P29084 291 aaKnown RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 RBBP4Q09028 425 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 C1DQ13901 141 aaKnown RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 KCNJ8Q15842 424 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 GLIPR1L2Q4G1C9 344 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 TTMPQ5BVD1 217 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 Q6ZTK2 550 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 SZRD1Q7Z422 152 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 GPAT4Q86UL3 456 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 PEX5LQ8IYB4 626 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 FAM110DQ8TAY7 271 aaPredicted RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 TBX15Q96SF7 602 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 ZNF607Q96SK3 696 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 ARHGDIGQ99819 225 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 KRTAP17-1Q9BYP8 105 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 BCL2L10Q9HD36 194 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MKLN1Q9UL63 735 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 CADP27708 2225 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 IGKV1D-42A0A075B6H8 117 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 A0A087WUJ7 227 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 A0A0G2JPF8 293 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 CENPVL3A0A0U1RRI6 287 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 MDFIC2A0A1B0GVS7 189 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PLSCR5A0PG75 271 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 SH3PXD2BA1X283 911 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 HNRNPCL2B2RXH8 293 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 HNRNPCL3B7ZW38 293 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 NDUFA2O43678 99 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 FMO6PO60774 539 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 HNRNPCL1O60812 293 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 CRCPO75575 148 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 HNRNPCL4P0DMR1 293 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 NR2C1P13056 603 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 GSTM3P21266 225 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 OMGP23515 440 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 GCAP28676 217 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PSMB10P40306 273 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 CSNK1A1P48729 337 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 CLNS1AP54105 237 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 GNB2P62879 340 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 MRPS34P82930 218 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 TNFAIP6P98066 277 aaPredicted RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 EMX2Q04743 252 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 TAF11Q15544 211 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 FOXB2Q5VYV0 432 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 DHRS4L2Q6PKH6 230 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 C1orf122Q6ZSJ8 110 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 NLRC3Q7RTR2 1065 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PAQR4Q8N4S7 273 aaPredicted RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 PNLDC1Q8NA58 520 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 LY6G5BQ8NDX9 201 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 C8orf46Q8TAG6 207 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 FNDC8Q8TC99 324 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 ZNF837Q96EG3 531 aaPredicted RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 OTUB1Q96FW1 271 aaPredicted RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 CDCA4Q9BXL8 241 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 ASPNQ9BXN1 380 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 TNFRSF12AQ9NP84 129 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 C20orf141Q9NUB4 165 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 ACOXLQ9NUZ1 547 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 GLTPQ9NZD2 209 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 EIF3KQ9UBQ5 218 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 CACNG2Q9Y698 323 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 EPPK1P58107 5090 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 ZNF816-ZNF321PA0A0X1KG74 233 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 EXOC1LA0A1B0GW35 172 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 ADARB2-AS1A8MUL3 147 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PLPP3O14495 311 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 GPANK1O95872 356 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 HPRP00739 348 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 FAM153BP0C7A2 387 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 ZCCHC18P0CG32 403 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PGA4P0DJD7 388 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PGA3P0DJD8 388 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 OR12D1P0DN82 309 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 TCN1P20061 433 aaPredicted RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 PRKAR1BP31321 381 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 APLNRP35414 380 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 GIPRP48546 466 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 RAD23AP54725 363 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 SEC61A1P61619 476 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 COPZ1P61923 177 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PLP2Q04941 152 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 CASP8Q14790 479 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 MAPK11Q15759 364 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 TSTQ16762 297 aaKnown RBP3.79□□□□□ -1.8
SNCA-213ENST00000618500 ARL9Q6T311 187 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 LINC00114Q6XXX2 140 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 C1orf87Q8N0U7 546 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 GOLGA6L1Q8N7Z2 621 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 PCYOX1LQ8NBM8 494 aa3.79□□□□□ -1.8
SNCA-213ENST00000618500 DUX5Q96PT3 197 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms