RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 GLYATL3Q5SZD4 288 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 CBLL1Q75N03 491 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 BPIFA4PQ86YQ2 179 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 PECRQ9BY49 303 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 KCNK6Q9Y257 313 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 SMIM35A0A1B0GVV1 85 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 SYPL2Q5VXT5 272 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 ISCA2Q86U28 154 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 HEYLQ9NQ87 328 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-208ENST00000618395 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL5A1-208ENST00000618395 UNC13CQ8NB66 2214 aa13.91□□□□□ -0.18
COL5A1-208ENST00000618395 AIFM1O95831 613 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 CRYABP02511 175 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SEH1LQ96EE3 360 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 STACQ99469 402 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 B3GALT5Q9Y2C3 310 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 GLB1P16278 677 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 TMEM115Q12893 351 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 CXCL17Q6UXB2 119 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 CNTN4Q8IWV2 1026 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 OR52I2Q8NH67 350 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 GPR61Q9BZJ8 451 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 ZMAT3Q9HA38 289 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 ARNTLO00327 626 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 TSPAN12O95859 305 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 HSD17B7P56937 341 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 GHRHRQ02643 423 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 KIAA2026Q5HYC2 2103 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SLC16A14Q7RTX9 510 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SSUH2Q9Y2M2 353 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 A0A1B0GV90 55 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 G6PCP35575 357 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 RPS15AP62244 130 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 FBXL18Q96ME1 805 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 FOXN4Q96NZ1 517 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 NPAS1Q99742 590 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 PBX4Q9BYU1 374 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 RNF208Q9H0X6 261 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 OR7C1O76099 320 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 CHRM4P08173 479 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 ITGB7P26010 798 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SPCS3P61009 180 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 FKBP1AP62942 108 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 MAJINQ3KP22 176 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 RAET1LQ5VY80 246 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 NXNL2Q5VZ03 156 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 PM20D1Q6GTS8 502 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 ABHD15Q6UXT9 468 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 ASPGQ86U10 573 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SEC11CQ9BY50 192 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 CHST11Q9NPF2 352 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 NDUFB11Q9NX14 153 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 MUTYHQ9UIF7 546 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SERTAD3Q9UJW9 196 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 S1PR4O95977 384 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SNRPGP62308 76 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 GPM6BQ13491 265 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 FAM69BQ5VUD6 431 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 MPC1LP0DKB6 136 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 MTCP1P56278 107 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 RUNX2Q13950 521 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 DOC2AQ14183 400 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 CPEB2Q7Z5Q1 589 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 OR5AU1Q8NGC0 362 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 C2orf15Q8WU43 125 aaKnown RBP13.9□□□□□ -0.18
COL5A1-208ENST00000618395 OR5B2Q96R09 309 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 OR8B4Q96RC9 309 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 SMOC2Q9H3U7 446 aa13.9□□□□□ -0.18
COL5A1-208ENST00000618395 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 COX5AP20674 150 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 FDXRP22570 491 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 LIPNQ5VXI9 398 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 CHST14Q8NCH0 376 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 FUBP1Q96AE4 644 aaKnown RBP13.89□□□□□ -0.19
COL5A1-208ENST00000618395 NDFIP1Q9BT67 221 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 DNAJB11Q9UBS4 358 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 SEMA7AO75326 666 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 C9orf131Q5VYM1 1079 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 B3GNTL1Q67FW5 361 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-208ENST00000618395 KDM4DQ6B0I6 523 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 DHRS7BQ6IAN0 325 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-208ENST00000618395 GSTO2Q9H4Y5 243 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 KIDINS220Q9ULH0 1771 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 LMTK2Q8IWU2 1503 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 WDR1O75083 606 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 VNN1O95497 513 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 OR4E1P0C645 316 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 EDN3P14138 238 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 CD82P27701 267 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 NNATQ16517 81 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 MARCH8Q5T0T0 291 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 CLEC20AQ6ZU45 233 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 SMOQ99835 787 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 PLEKHF2Q9H8W4 249 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms