RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 GRM6O15303 877 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 STK17BO94768 372 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MBP02144 154 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GAAP10253 952 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 BSGP35613 385 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 RNF165Q6ZSG1 346 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TMPPEQ6ZT21 453 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ZNF485Q8NCK3 441 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PPP1R14AQ96A00 147 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 LMLNQ96KR4 655 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ACTRT3Q9BYD9 372 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 NOSIPQ9Y314 301 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TMED7Q9Y3B3 224 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 POLR2AP24928 1970 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TRAV14DV4A0A0A6YYC5 116 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SLC5A10A0PJK1 596 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 C4orf47A7E2U8 309 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PRF1P14222 555 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 FLT3LGP49771 235 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ASCL1P50553 236 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 DUSP2Q05923 314 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PDGFRLQ15198 375 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 RPL7L1Q6DKI1 246 aaKnown RBP12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CD300LDQ6UXZ3 194 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TGIF2LXQ8IUE1 241 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MISPQ8IVT2 679 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 E9PQ18 207 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SOX1O00570 391 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 RAB5AP20339 215 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PCP4P48539 62 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 DUSP5Q16690 384 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SLC25A30Q5SVS4 291 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CDPF1Q6NVV7 123 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 BEND4Q6ZU67 534 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GPR148Q8TDV2 347 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SPACA5Q96QH8 159 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ALG12Q9BV10 488 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SLC22A13Q9Y226 551 aa12.78□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GSTZ1O43708 216 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GREM1O60565 184 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MT-ND4LP03901 98 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SELLP14151 372 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SERPINA2P20848 420 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 NANOS3P60323 173 aaKnown RBP12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MARCH1Q8TCQ1 289 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 APOBEC4Q8WW27 367 aaKnown RBP12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EDARADDQ8WWZ3 215 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 INPP5EQ9NRR6 644 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 KCNK7Q9Y2U2 307 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 RNF215Q9Y6U7 377 aa12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF11A-205ENST00000616710 NDUFB2O95178 105 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 CPMP14384 443 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 CCINQ13939 588 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 GAMTQ14353 236 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 TRMT12Q53H54 448 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 ARTNQ5T4W7 220 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 TRAPPC6BQ86SZ2 158 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 OR5T1Q8NG75 326 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 OR5AP2Q8NGF4 316 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 TGM7Q96PF1 710 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 PRSS16Q9NQE7 514 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 TNFSF18Q9UNG2 199 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 DHDHQ9UQ10 334 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 ZNF726A6NNF4 738 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 OR8U9P0C7N5 309 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 CTXN1P60606 82 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 ATPAF1Q5TC12 328 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 SKA3Q8IX90 412 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 TRAM1L1Q8N609 369 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 OR2G2Q8NGZ5 317 aa12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 INSM2Q96T92 566 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF11A-205ENST00000616710 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 FKTNO75072 461 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 OR5M8Q8NGP6 311 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 SEC11CQ9BY50 192 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 ACAD8Q9UKU7 415 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 IFNA10P01566 189 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 DPP4P27487 766 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 GSK3AP49840 483 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 CLDN6P56747 220 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 TLE1Q04724 770 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 MRPL58Q14197 206 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 SOHLH1Q5JUK2 328 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 ST6GALNAC5Q9BVH7 336 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 MMP26Q9NRE1 261 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 MEMO1Q9Y316 297 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 PCYT1BQ9Y5K3 369 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 C17orf113A0A1B0GUU1 675 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 HIST1H1TP22492 207 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 SLC2A5P22732 501 aa12.76□□□□□ -0.37
TNFRSF11A-205ENST00000616710 HNF4GQ14541 408 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms