RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 AVPI1Q5T686 147 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 SLC35F3Q8IY50 421 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 TEX19Q8NA77 164 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 TMEM52Q8NDY8 209 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 ROBO4Q8WZ75 1007 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 MENTQ9BUN1 341 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.49
MSH6-214ENST00000616033 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 CTAG2O75638 210 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 CYB5AP00167 134 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 CSF1P09603 554 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 ADH5P11766 374 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 CD53P19397 219 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 DIO1P49895 249 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 DHODHQ02127 395 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 PDGFRLQ15198 375 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 RNF113BQ8IZP6 322 aaKnown RBP11.96□□□□□ -0.49
MSH6-214ENST00000616033 ELP5Q8TE02 316 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 SSX3Q99909 188 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 PIGQQ9BRB3 760 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 COMMD4Q9H0A8 199 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 DZANK1Q9NVP4 752 aa11.96□□□□□ -0.49
MSH6-214ENST00000616033 OTOL1A6NHN0 477 aaPredicted RBP11.96□□□□□ -0.5
MSH6-214ENST00000616033 OR6C65A6NJZ3 312 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 C1orf196B1AJZ1 125 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 P2RX6O15547 441 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 SOX15O60248 233 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 DAOP14920 347 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 EPCAMP16422 314 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 TYRP1P17643 537 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 ARHGAP19Q14CB8 494 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 LY6G6FQ5SQ64 297 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 NKAIN2Q5VXU1 208 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 TMPPEQ6ZT21 453 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 GVQW1Q8N7I0 195 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 PLEKHA1Q9HB21 404 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 SDHAF3Q9NRP4 125 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 NDRG3Q9UGV2 375 aa11.96□□□□□ -0.5
MSH6-214ENST00000616033 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.96□□□□□ -0.5
MSH6-214ENST00000616033 ARHGEF17Q96PE2 2063 aaPredicted RBP11.96□□□□□ -0.5
MSH6-214ENST00000616033 FREM3P0C091 2139 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 NOTCH4Q99466 2003 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 A0A1W2PP55 124 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 GPR37O15354 613 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 AQP8O94778 261 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 RPA2P15927 270 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 MAP3K8P41279 467 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 ID4P47928 161 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 IL13RA1P78552 427 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 FCRL6Q6DN72 434 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 RPL13AP3Q6NVV1 102 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 JMJD6Q6NYC1 403 aaPredicted RBP11.95□□□□□ -0.5
MSH6-214ENST00000616033 PSRC1Q6PGN9 363 aaPredicted RBP11.95□□□□□ -0.5
MSH6-214ENST00000616033 DPPA2Q7Z7J5 298 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 BIVMQ86UB2 503 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 METTL27Q8N6F8 245 aaPredicted RBP11.95□□□□□ -0.5
MSH6-214ENST00000616033 OR52R1Q8NGF1 315 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 ISOC2Q96AB3 205 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 FAM3DQ96BQ1 224 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 ARL5BQ96KC2 179 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 ZNF251Q9BRH9 671 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 DENND4AQ7Z401 1863 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 PRUNE2Q8WUY3 3088 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 LRRK1Q38SD2 2015 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 A0A1W2PPE3 182 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 C2orf74A8MZ97 194 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 HRKO00198 91 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 XRCC3O43542 346 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 FBXO24O75426 580 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 PCP4P48539 62 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 MDGA2Q7Z553 956 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 OR5T2Q8NGG2 359 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 OR6N1Q8NGY5 312 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 CCDC107Q8WV48 283 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 AMELYQ99218 206 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 GAREM1Q9H706 876 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 MRM2Q9UI43 246 aaKnown RBP11.95□□□□□ -0.5
MSH6-214ENST00000616033 THSD7BQ9C0I4 1608 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 B3GALT2O43825 422 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 PEBP1P30086 187 aaKnown RBP11.95□□□□□ -0.5
MSH6-214ENST00000616033 NKAPLQ5M9Q1 402 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 GLYATL3Q5SZD4 288 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 C11orf87Q6NUJ2 197 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 SYS1Q8N2H4 156 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 NPEPL1Q8NDH3 523 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 CCL4L1Q8NHW4 92 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 SLC25A36Q96CQ1 311 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 FAM83CQ9BQN1 747 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 SYT4Q9H2B2 425 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 MED9Q9NWA0 146 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 SERGEFQ9UGK8 458 aa11.95□□□□□ -0.5
MSH6-214ENST00000616033 MED19A0JLT2 244 aaPredicted RBP11.94□□□□□ -0.5
MSH6-214ENST00000616033 METTL12A8MUP2 240 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 ZNF736B4DX44 427 aaPredicted RBP11.94□□□□□ -0.5
MSH6-214ENST00000616033 GPRIN2O60269 458 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 SERPINA5P05154 406 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 NME1P15531 152 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms