RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 MCRIP1C9JLW8 97 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 OR7C1O76099 320 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SLC34A2O95436 690 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 PIPP12273 146 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 AKR1C4P17516 323 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ACHEP22303 614 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 HTR2CP28335 458 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 IL2RGP31785 369 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 KIR2DL3P43628 341 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 TAS2R31P59538 309 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SEC61A1P61619 476 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF117Q03924 483 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 LSAMPQ13449 338 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 MRM1Q6IN84 353 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 OGFOD3Q6PK18 319 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 BEST3Q8N1M1 668 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SNAPC3Q92966 411 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 TMEM59Q9BXS4 323 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 MRPS28Q9Y2Q9 187 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 KLK4Q9Y5K2 254 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 A0A0G2JMZ2 1700 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 LRRC37A2A6NM11 1700 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 MYO10Q9HD67 2058 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 ZAR1LA6NP61 321 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 DHHO43323 396 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 WNT1P04628 370 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 CNR1P21554 472 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 CD40LGP29965 261 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 FXYD4P59646 89 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 EBPQ15125 230 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 GRK1Q15835 563 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 POGLUT1Q8NBL1 392 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 VRK1Q99986 396 aaPredicted RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 HINT3Q9NQE9 182 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 MED29Q9NX70 200 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 ASH2LQ9UBL3 628 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 NUP50Q9UKX7 468 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 IMPA2O14732 288 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 CBX7O95931 251 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 AKAIN1P0CW23 69 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 SRD5A2P31213 254 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 IDH3GP51553 393 aaPredicted RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 PLGLAQ15195 96 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 TSC22D1Q15714 1073 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 SFRP4Q6FHJ7 346 aaPredicted RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 BCDIN3DQ7Z5W3 292 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 SEMA6DQ8NFY4 1073 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 OR4C3Q8NH37 302 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 ROBO4Q8WZ75 1007 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 SLAMF6Q96DU3 332 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 CMSS1Q9BQ75 279 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 RAB33BQ9H082 229 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 CRLF2Q9HC73 371 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 LANCL2Q9NS86 450 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 ZFP57Q9NU63 452 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 ATP23Q9Y6H3 246 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 TET1Q8NFU7 2136 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 FTH1P19P0C7X4 201 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 LSSP48449 732 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 MTNR1BP49286 362 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 RPS25P62851 125 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 IKZF1Q13422 519 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 RNPS1Q15287 305 aaKnown RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 SLC23A3Q6PIS1 610 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 NCCRP1Q6ZVX7 275 aaPredicted RBP8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 ARSGQ96EG1 525 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 AIFM2Q9BRQ8 373 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF286AQ9HBT8 521 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 TREM1Q9NP99 234 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 MYO16Q9Y6X6 1858 aa8.57□□□□□ -1.04
CLTCL1-208ENST00000615606 IGHV3-15A0A0B4J1V0 119 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF780AO75290 641 aaPredicted RBP8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 NXPH2O95156 264 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 HEXAP06865 529 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 UBBP0CG47 229 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF81P51508 661 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 TIGD3Q6B0B8 471 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 ACSM5Q6NUN0 579 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 WFDC8Q8IUA0 241 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 TMEM99Q8N816 258 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 SAP25Q8TEE9 199 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 KISS1RQ969F8 398 aaPredicted RBP8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 FGGYQ96C11 551 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 PRRT1Q99946 306 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 PIGLQ9Y2B2 252 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 PCDHGA1Q9Y5H4 931 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 BORCS7-ASMTA0A0B4J1R7 106 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 A0A0B4J2E0 115 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 A0A1B0GX12 115 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 hCG_1809904A0A1W2PP81 198 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 A0A1W2PPE2 198 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 A0A1W2PR64 198 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 A0A1W2PRV1 198 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 TMEM129A0AVI4 362 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 OR5H15A6NDH6 313 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 HSPB2A8KAH6 182 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 PEX14O75381 377 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF806P0C7X5 589 aa8.56□□□□□ -1.04
CLTCL1-208ENST00000615606 CDK2P24941 298 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms