RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 KRT72Q14CN4 511 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 CHRFAM7AQ494W8 412 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 RGS7BPQ6MZT1 257 aaPredicted RBP13.48□□□□□ -0.25
IRF3-226ENST00000600453 UGT2A3Q6UWM9 527 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 ZNF584Q8IVC4 421 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 C1orf174Q8IYL3 243 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 LRRC18Q8N456 261 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 FGFBP3Q8TAT2 258 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 C11orf40Q8WZ69 217 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 HDAC2Q92769 488 aaKnown RBP13.48□□□□□ -0.25
IRF3-226ENST00000600453 WACQ9BTA9 647 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 MRPL37Q9BZE1 423 aaKnown RBP13.48□□□□□ -0.25
IRF3-226ENST00000600453 NMNAT1Q9HAN9 279 aaPredicted RBP13.48□□□□□ -0.25
IRF3-226ENST00000600453 MAN2C1Q9NTJ4 1040 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 ADA2Q9NZK5 511 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 ENPP4Q9Y6X5 453 aa13.48□□□□□ -0.25
IRF3-226ENST00000600453 A0A087WUU8 490 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 APEHP13798 732 aaKnown RBP13.47□□□□□ -0.25
IRF3-226ENST00000600453 RPL4P36578 427 aaKnown RBP13.47□□□□□ -0.25
IRF3-226ENST00000600453 SMIM11AP58511 58 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 PCBD1P61457 104 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 TOP3AQ13472 1001 aaPredicted RBP13.47□□□□□ -0.25
IRF3-226ENST00000600453 SGCAQ16586 387 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 ZBED5Q49AG3 693 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 FAM27BQ5VT28 67 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 SLC25A47Q6Q0C1 308 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 ARIH2OSQ8N7S6 290 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 FAM156AQ8NDB6 213 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 ZNF519Q8TB69 540 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 GORASP2Q9H8Y8 452 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 DCAF13Q9NV06 445 aaKnown RBP13.47□□□□□ -0.25
IRF3-226ENST00000600453 NDE1Q9NXR1 346 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 SLCO1C1Q9NYB5 712 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 GMPR2Q9P2T1 348 aaKnown RBP13.47□□□□□ -0.25
IRF3-226ENST00000600453 EIF3KQ9UBQ5 218 aaKnown RBP13.47□□□□□ -0.25
IRF3-226ENST00000600453 GRHPRQ9UBQ7 328 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 LPAR3Q9UBY5 353 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 DUSP13Q9UII6 198 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
IRF3-226ENST00000600453 TRAV27A0A087WT01 109 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 A0A1W2PRQ8 180 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 XKRYO14609 159 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 PRSS23O95084 383 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 SLC2A10O95528 541 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 LCKP06239 509 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 H1F0P07305 194 aaKnown RBP13.46□□□□□ -0.25
IRF3-226ENST00000600453 NCK1P16333 377 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 ZNF23P17027 643 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 DRD4P21917 467 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 UCP2P55851 309 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 DGCR6Q14129 220 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 PODNL1Q6PEZ8 512 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 PRIMA1Q86XR5 153 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 LRRC75AQ8NAA5 344 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 SYNPRQ8TBG9 265 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 NSMAFQ92636 917 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 NMD3Q96D46 503 aaKnown RBP13.46□□□□□ -0.25
IRF3-226ENST00000600453 LRRC37BQ96QE4 947 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 SYT3Q9BQG1 590 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 ARL2BPQ9Y2Y0 163 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 TIMM10BQ9Y5J6 103 aa13.46□□□□□ -0.25
IRF3-226ENST00000600453 A0A1W2PPW3 197 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
IRF3-226ENST00000600453 LMX1BO60663 402 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 DCTN3O75935 186 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 MT-ND5P03915 603 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 CD14P08571 375 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 CST2P09228 141 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 MMP7P09237 267 aaPredicted RBP13.45□□□□□ -0.26
IRF3-226ENST00000600453 IGHV4-31P0DP07 118 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 STOMP27105 288 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 MNAT1P51948 309 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 CHN2P52757 468 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 SPATS1Q496A3 300 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 PABPC1L2AQ5JQF8 200 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 FAM166AQ6J272 317 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 TBPL2Q6SJ96 375 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 SYT9Q86SS6 491 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 ZCCHC24Q8N2G6 241 aaKnown RBP13.45□□□□□ -0.26
IRF3-226ENST00000600453 SNX33Q8WV41 574 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 HPS1Q92902 700 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 BEX2Q9BXY8 128 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 BPESC1Q9GZL8 116 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 ADAM21Q9UKJ8 722 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 AURKCQ9UQB9 309 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 UGT2A1Q9Y4X1 527 aa13.45□□□□□ -0.26
IRF3-226ENST00000600453 LOC100289279A0A1B0GTE1 492 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 NDUFB2O95178 105 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 FAM157BP0CG42 384 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 HSD17B1P14061 328 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 ZNF250P15622 560 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 ZNF32P17041 273 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 CDAP32320 146 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 GDI2P50395 445 aaKnown RBP13.44□□□□□ -0.26
IRF3-226ENST00000600453 TMEM33P57088 247 aa13.44□□□□□ -0.26
IRF3-226ENST00000600453 KLF3P57682 345 aaPredicted RBP13.44□□□□□ -0.26
IRF3-226ENST00000600453 MRPS11P82912 194 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms