RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FKBP7Q9Y680 259 aa11.88□□□□□ -0.51
SCAF1-203ENST00000598359 MCIDASD6RGH6 385 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 DHHO43323 396 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
SCAF1-203ENST00000598359 RAB36O95755 333 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF682O95780 498 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 IGFBP1P08833 259 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-203ENST00000598359 SLC25A16P16260 332 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 NR4A1P22736 598 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 PDLIM4P50479 330 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 GTF2A1P52655 376 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-203ENST00000598359 CLRN1P58418 232 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 LOXL1Q08397 574 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-203ENST00000598359 GGTLC2Q14390 218 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 LRRC36Q1X8D7 754 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 FKBP9P1Q75LS8 142 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF584Q8IVC4 421 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 SLC22A24Q8N4F4 322 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 OR4K5Q8NGD3 323 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 ASB10Q8WXI3 467 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 FOXN4Q96NZ1 517 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 DOK1Q99704 481 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF442Q9H7R0 627 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 INIPQ9NRY2 104 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
SCAF1-203ENST00000598359 A0A1W2PRG6 482 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 CXCR6O00574 342 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 TRMUO75648 421 aaKnown RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 TIPRLO75663 272 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 PRSS23O95084 383 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 UBL3O95164 117 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 IGHG1P01857 330 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 ADRA2AP08913 450 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 CCL2P13500 99 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF35P13682 527 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 NCK1P16333 377 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 ZNF16P17020 682 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 FASP25445 335 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 PPOXP50336 477 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 SELENOWP63302 87 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 TOP3AQ13472 1001 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 ATP6AP1Q15904 470 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 C6orf52Q5T4I8 152 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 PIWIL3Q7Z3Z3 882 aaKnown RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 IGFN1Q86VF2 1251 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 LRP11Q86VZ4 500 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 PAQR4Q8N4S7 273 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 NOXO1Q8NFA2 376 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 MCHR2Q969V1 340 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 PRRC1Q96M27 445 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 MRPL13Q9BYD1 178 aaKnown RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 MRPL37Q9BZE1 423 aaKnown RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 POLR2J2Q9GZM3 115 aaKnown RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 POLR2J3Q9H1A7 115 aaKnown RBP11.86□□□□□ -0.51
SCAF1-203ENST00000598359 TPK1Q9H3S4 243 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 DYNLRB1Q9NP97 96 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 MED31Q9Y3C7 131 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 CMAHPQ9Y471 501 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 CUBNO60494 3623 aa11.86□□□□□ -0.51
SCAF1-203ENST00000598359 IGKV1D-43A0A0B4J1Z2 117 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 MAGEA13PA6NCF6 341 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 A8MV72 311 aaPredicted RBP11.85□□□□□ -0.51
SCAF1-203ENST00000598359 VWC2LB2RUY7 222 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 LYNX1G3V0Z9 82 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 FFAR1O14842 300 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 GSTA4O15217 222 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 TLX2O43763 284 aaPredicted RBP11.85□□□□□ -0.51
SCAF1-203ENST00000598359 SLC2A10O95528 541 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 CSF3P09919 207 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 OR8G3PP0DMU2 310 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 IGHV4-31P0DP07 118 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 IFI30P13284 250 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 MAKP20794 623 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 CDAP32320 146 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 NR4A2P43354 598 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 VLDLRP98155 873 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 FMODQ06828 376 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 MED21Q13503 144 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 MAD2L1BPQ15013 274 aaPredicted RBP11.85□□□□□ -0.51
SCAF1-203ENST00000598359 HIST3H3Q16695 136 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 LRRC18Q8N456 261 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 CLDN22Q8N7P3 220 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 IL17RDQ8NFM7 739 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 HDAC2Q92769 488 aaKnown RBP11.85□□□□□ -0.51
SCAF1-203ENST00000598359 EME1Q96AY2 570 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 BPIFA2Q96DR5 249 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 CENPNQ96H22 339 aaPredicted RBP11.85□□□□□ -0.51
SCAF1-203ENST00000598359 PIMREGQ9BSJ6 248 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 OR51B6Q9H340 312 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 Q9H521 79 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 MAGIXQ9H6Y5 334 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 MAN2C1Q9NTJ4 1040 aa11.85□□□□□ -0.51
SCAF1-203ENST00000598359 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
SCAF1-203ENST00000598359 TRAV27A0A087WT01 109 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 GMNNO75496 209 aa11.84□□□□□ -0.51
SCAF1-203ENST00000598359 SERPINA1P01009 418 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms