RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SPATA46Q5T0L3 261 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 THEM4Q5T1C6 240 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 BLOC1S3Q6QNY0 202 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 ARMC8Q8IUR7 673 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 BCL6BQ8N143 479 aaPredicted RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 SMYD1Q8NB12 490 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 HIPK4Q8NE63 616 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 NOXO1Q8NFA2 376 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 OR4D11Q8NGI4 311 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 OR6T1Q8NGN1 323 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 IPCEF1Q8WWN9 437 aaPredicted RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 NMD3Q96D46 503 aaKnown RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 POM121L2Q96KW2 1035 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 ZNF48Q96MX3 618 aaPredicted RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 ZNF607Q96SK3 696 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 UNKLQ9H9P5 680 aaKnown RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 ZMAT3Q9HA38 289 aaKnown RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 NANSQ9NR45 359 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 MMP26Q9NRE1 261 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 DCAF16Q9NXF7 216 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 UBAP1Q9NZ09 502 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 PURGQ9UJV8 347 aaKnown RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 ZNF229Q9UJW7 825 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 NUP50Q9UKX7 468 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 POLR3KQ9Y2Y1 108 aaPredicted RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 UGT2A1Q9Y4X1 527 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 TGP01266 2768 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 LOC100509620A0A075B734 347 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 ISPDA4D126 451 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 CPSF4LA6NMK7 179 aaKnown RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 CENPBD1B2RD01 187 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 IGHV2-70P01814 119 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 CD55P08174 381 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 ZNF12P17014 697 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 STOMP27105 288 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 ATP4BP51164 291 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 ZNF84P51523 738 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 CLRN1P58418 232 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 MRPS34P82930 218 aaKnown RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 HSF2Q03933 536 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 ZNF718Q3SXZ3 478 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 ENTPD8Q5MY95 495 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 C10orf128Q5T292 105 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 MBNL2Q5VZF2 373 aaKnown RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 TTC33Q6PID6 262 aaPredicted RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 EPGNQ6UW88 154 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 RBMS3Q6XE24 437 aaKnown RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 RFPL4BQ6ZWI9 263 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 PTOV1Q86YD1 416 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 TREML1Q86YW5 311 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 RBM45Q8IUH3 476 aaKnown RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 LRRC18Q8N456 261 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 SYT14Q8NB59 555 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 SLC25A40Q8TBP6 338 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 KLF14Q8TD94 323 aaPredicted RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 ST7LQ8TDW4 575 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 ADAMTS16Q8TE57 1224 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 GEMIN6Q8WXD5 167 aaKnown RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 ASB10Q8WXI3 467 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 NABP1Q96AH0 204 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 TRIM44Q96DX7 344 aaPredicted RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 SPDL1Q96EA4 605 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 CPPED1Q9BRF8 314 aaPredicted RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 SLC19A3Q9BZV2 496 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 OR2J1Q9GZK6 312 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 SIAEQ9HAT2 523 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 NPHS2Q9NP85 383 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 MEPEQ9NQ76 525 aaPredicted RBP8.42□□□□□ -1.06
LIG1-209ENST00000596104 PLEK2Q9NYT0 353 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 KLHL21Q9UJP4 597 aa8.42□□□□□ -1.06
LIG1-209ENST00000596104 WNK2Q9Y3S1 2297 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 IGKV1D-43A0A0B4J1Z2 117 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 PLSCR5A0PG75 271 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 TRAPPC13A5PLN9 417 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 TRAPPC2LH3BP13 241 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 CLDN34H7C241 214 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 M0QX08 132 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 KPNA4O00629 521 aaPredicted RBP8.41□□□□□ -1.06
LIG1-209ENST00000596104 ICMTO60725 284 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 ERLIN1O75477 346 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 TRMUO75648 421 aaKnown RBP8.41□□□□□ -1.06
LIG1-209ENST00000596104 IGHMP01871 453 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 OPN1SWP03999 348 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 F13BP05160 661 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
LIG1-209ENST00000596104 ACADSP16219 412 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 ZNF32P17041 273 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 CCNOP22674 350 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 GCH1P30793 250 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 CDAP32320 146 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 RBMXP38159 391 aaKnown RBP8.41□□□□□ -1.06
LIG1-209ENST00000596104 SLC18A1P54219 525 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 UGT2B15P54855 530 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 STX1BP61266 288 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 IL13RA1P78552 427 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 ZNF154Q13106 437 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 ARMCX4Q5H9R4 360 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 ARMC4Q5T2S8 1044 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 DLEU7Q6UYE1 221 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms