RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MUC13Q9H3R2 512 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 CCNB1IP1Q9NPC3 277 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 CD300AQ9UGN4 299 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 AURKCQ9UQB9 309 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 DNHD1Q96M86 4753 aa15.32■□□□□ 0.04
SHKBP1-204ENST00000594862 ARFGEF3Q5TH69 2177 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 IGHV4-30-2A0A087WSY4 118 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 LOC390937A0A1W2PQ73 354 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 ARPC2O15144 300 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 TLX2O43763 284 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 NDUFB2O95178 105 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 SLC2A10O95528 541 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 IFNGR2P38484 337 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 SELENOVP59797 346 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 PCBD1P61457 104 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 LSM11P83369 360 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 VLDLRP98155 873 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 HSF2Q03933 536 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 LOXL1Q08397 574 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 FAM27BQ5VT28 67 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 SLC25A47Q6Q0C1 308 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 TSEN54Q7Z6J9 526 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 SVOPLQ8N434 492 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 CCDC197Q8NCU1 140 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 ZNF540Q8NDQ6 660 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 DOK1Q99704 481 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 PIMREGQ9BSJ6 248 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 MS4A5Q9H3V2 200 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 GPR160Q9UJ42 338 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 UGT2A1Q9Y4X1 527 aa15.31■□□□□ 0.04
SHKBP1-204ENST00000594862 M0R233 179 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 CDC42EP2O14613 210 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 SYNGR3O43761 229 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 SEMG1P04279 462 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 FABP3P05413 133 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 PCSK6P29122 969 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 APLNRP35414 380 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 LIMS1P48059 325 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 FMODQ06828 376 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 FHL1Q13642 323 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 TBPL2Q6SJ96 375 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 FOXL2NBQ6ZUU3 175 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 ADCK1Q86TW2 530 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 IGFN1Q86VF2 1251 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 ZNF584Q8IVC4 421 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 C1orf174Q8IYL3 243 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 FAM86B1Q8N7N1 296 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 NSMAFQ92636 917 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 FAM46AQ96IP4 442 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 RSRC1Q96IZ7 334 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 ZNF570Q96NI8 536 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 GPX7Q96SL4 187 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 BCL2L14Q9BZR8 327 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 JMJD1CQ15652 2540 aa15.3■□□□□ 0.04
SHKBP1-204ENST00000594862 CD5LO43866 347 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 GADD45GO95257 159 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 CST2P09228 141 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 MMP7P09237 267 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 PATE4P0C8F1 98 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 FUT4P22083 530 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 CALB2P22676 271 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 RAD52P43351 418 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 SPIBQ01892 262 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 RGS7BPQ6MZT1 257 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 SYT9Q86SS6 491 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 ALDH16A1Q8IZ83 802 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 LRRC18Q8N456 261 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 FITM2Q8N6M3 262 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 FGFBP3Q8TAT2 258 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 HTRA1Q92743 480 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 NABP1Q96AH0 204 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 NSL1Q96IY1 281 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 ACTR3BQ9P1U1 418 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 TMCC3Q9ULS5 477 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 SIGLEC7Q9Y286 467 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 V9GYQ6 96 aa15.29■□□□□ 0.04
SHKBP1-204ENST00000594862 FN1P02751 2386 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 CR1P17927 2039 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 SH3PXD2BA1X283 911 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 C12orf71A8MTZ7 269 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 APEHP13798 732 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 MSR1P21757 451 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 USF1P22415 310 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 SDHAP31040 664 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 OMPP47874 163 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 RPS6KA3P51812 740 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 ERVK-25P63136 954 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 KRR1Q13601 381 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 SGCAQ16586 387 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 MOGQ16653 247 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 PABPC1L2AQ5JQF8 200 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 MEX3DQ86XN8 651 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 MRPL37Q9BZE1 423 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 IL1RAPQ9NPH3 570 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 HIVEP2P31629 2446 aa15.28■□□□□ 0.04
SHKBP1-204ENST00000594862 TRBV4-1A0A0J9YWV2 114 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 A0A1W2PPL8 197 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 TMEM129A0AVI4 362 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 PRSS37A4D1T9 235 aa15.27■□□□□ 0.04
SHKBP1-204ENST00000594862 UNC119BA6NIH7 251 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms