RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 PDE7BQ9NP56 450 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR2S2Q9NQN1 319 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PNO1Q9NRX1 252 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 EVA1BQ9NVM1 165 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GSKIPQ9P0R6 139 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 NTMQ9P121 344 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 DNAJB11Q9UBS4 358 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GHRLQ9UBU3 117 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 KCNG2Q9UJ96 466 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 STRAPQ9Y3F4 350 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF638Q14966 1978 aaKnown RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 PTPRDP23468 1912 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FAM230AA0A1W2PPH8 454 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PLSCR5A0PG75 271 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF860A6NHJ4 632 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 VSTM2BA6NLU5 285 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 H0YGG7 62 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PYCARD-AS1I3L0S3 204 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ABCD4O14678 606 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SGCEO43556 437 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SELENOFO60613 162 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ADAM11O75078 769 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ATG12O94817 140 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HBE1P02100 147 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SFTPBP07988 381 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CXCL3P19876 107 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PTNP21246 168 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CALCRP30988 508 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 WASP42768 502 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 RAB13P51153 203 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 F2RL1P55085 397 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CLRN1P58418 232 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ARF3P61204 181 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 NAAAQ02083 359 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ZNF273Q14593 569 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 RSU1Q15404 277 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC36A2Q495M3 483 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR10K2Q6IF99 312 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 POMZP3Q6PJE2 187 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 DEGS2Q6QHC5 323 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 LYPD8Q6UX82 237 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 ANKRD33Q7Z3H0 272 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 GALNTL5Q7Z4T8 443 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PRSS35Q8N3Z0 413 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FAM160A2Q8N612 972 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 EXD3Q8N9H8 876 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR51D1Q8NGF3 324 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR5M8Q8NGP6 311 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR2G2Q8NGZ5 317 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 OR4K15Q8NH41 348 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MFSD8Q8NHS3 518 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PMEPA1Q969W9 287 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 CDCA3Q99618 268 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 SLC25A31Q9H0C2 315 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 S1PR5Q9H228 398 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PLEKHA2Q9HB19 425 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 MYOZ1Q9NP98 299 aaPredicted RBP3.23□□□□□ -1.89
VMP1-216ENST00000592790 IL23AQ9NPF7 189 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 FANCFQ9NPI8 374 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 RNF186Q9NXI6 227 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 SUSD2Q9UGT4 822 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 HIF3AQ9Y2N7 669 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 AUP1Q9Y679 476 aa3.23□□□□□ -1.89
VMP1-216ENST00000592790 PRAMEF25A6NGN4 478 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR52A4PA6NMU1 304 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 K7EPK0 472 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 NUPL2O15504 423 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 SMIM6P0DI80 62 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 DCTDP32321 178 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 EMP2P54851 167 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CSNK2A1P68400 391 aaPredicted RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 PDZK1IP1Q13113 114 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 EXOSC7Q15024 291 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF141Q15928 474 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ODF4Q2M2E3 257 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 LAMTOR1Q6IAA8 161 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RGS7BPQ6MZT1 257 aaPredicted RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 UNQ9370/PRO34162Q6UXP9 181 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 LRRC69Q6ZNQ3 347 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 Q6ZTK2 550 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF687Q8N1G0 1237 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 FAM71E2Q8N5Q1 922 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 WDSUB1Q8N9V3 476 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ACBD4Q8NC06 268 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF485Q8NCK3 441 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CSNK2A3Q8NEV1 391 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CD300LFQ8TDQ1 290 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RNF128Q8TEB7 428 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CCDC74AQ96AQ1 378 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 MMABQ96EY8 250 aaPredicted RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 TCTN2Q96GX1 697 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 PTCHD1Q96NR3 888 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 UTP23Q9BRU9 249 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 LAT2Q9GZY6 243 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 PTGES2Q9H7Z7 377 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RPS10P5Q9NQ39 176 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C19orf25Q9UFG5 118 aaPredicted RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR5V1Q9UGF6 321 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 APOBEC3BQ9UH17 382 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 ST6GALNAC2Q9UJ37 374 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms