RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TEX29Q8N6K0 151 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 ZIC4Q8N9L1 334 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 LINC01356Q8N9X3 169 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 OR52P1PQ8NH57 321 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 MFSD8Q8NHS3 518 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 BCL2L2Q92843 193 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-226ENST00000591534 RDH12Q96NR8 316 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 CDADC1Q9BWV3 514 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 RSPO3Q9BXY4 272 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-226ENST00000591534 BPESC1Q9GZL8 116 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 PCDHAC1Q9H158 963 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 SELENONQ9NZV5 590 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 CRNNQ9UBG3 495 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-226ENST00000591534 RCE1Q9Y256 329 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 NBEAL1Q6ZS30 2694 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 CR1P17927 2039 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 A0A0A6YYJ9 748 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 ZC3H12DA2A288 527 aaKnown RBP8.17□□□□□ -1.1
BRCA1-226ENST00000591534 RPL36A-HNRNPH2H7BZ11 118 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 hCG_2039718K7EN88 272 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 M0QX08 132 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 FMO6PO60774 539 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 IGLV1-44P01699 117 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 CECR9P0C854 216 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 THRBP10828 461 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 ANPEPP15144 967 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 RHCEP18577 417 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
BRCA1-226ENST00000591534 RRM2P31350 389 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 SELENOPP49908 381 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 RPS6KA3P51812 740 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 MS4A2Q01362 244 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 ROR2Q01974 943 aaKnown RBP8.17□□□□□ -1.1
BRCA1-226ENST00000591534 EGR3Q06889 387 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 CCNIQ14094 377 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 ADRM1Q16186 407 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 CYBRD1Q53TN4 286 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 RNF220Q5VTB9 566 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 DHRS4L2Q6PKH6 230 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 CYP2R1Q6VVX0 501 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 IL17RELQ6ZVW7 336 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 THAP5Q7Z6K1 395 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 PTOV1Q86YD1 416 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 THNSL2Q86YJ6 484 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF786Q8N393 782 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 NFKBIDQ8NI38 313 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 EME1Q96AY2 570 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 TMEM19Q96HH6 336 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 ALKBH3Q96Q83 286 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-226ENST00000591534 CHID1Q9BWS9 393 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 TEX12Q9BXU0 123 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 ANKRD19PQ9H560 264 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 REEP1Q9H902 201 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 RPS6KB2Q9UBS0 482 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 USP22Q9UPT9 525 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 NOX1Q9Y5S8 564 aa8.17□□□□□ -1.1
BRCA1-226ENST00000591534 TMEM82A0PJX8 343 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 CASQ2O14958 399 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-226ENST00000591534 FRS3O43559 492 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 E2F6O75461 281 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 CST1P01037 141 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 IGKV3-15P01624 115 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 TACSTD2P09758 323 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 GKN3PP0CG01 181 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ACAA2P42765 397 aaKnown RBP8.16□□□□□ -1.1
BRCA1-226ENST00000591534 MAGEA2P43356 314 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 CAPZA2P47755 286 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 EVX1P49640 407 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 DVL1P1P54792 670 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-226ENST00000591534 IL1RL1Q01638 556 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 TEKQ02763 1124 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 POU3F1Q03052 451 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-226ENST00000591534 DAG1Q14118 895 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 MFSD13AQ14CX5 517 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ATP6AP1Q15904 470 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF311Q5JNZ3 666 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 C12orf54Q6X4T0 127 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 RRM2BQ7LG56 351 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 VRK2Q86Y07 508 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ZDHHC21Q8IVQ6 265 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 FAM156AQ8NDB6 213 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ICA1LQ8NDH6 482 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ZFAND2BQ8WV99 257 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 CANT1Q8WVQ1 401 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 PYDC1Q8WXC3 89 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 MAL2Q969L2 176 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 SLC25A36Q96CQ1 311 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 TPD52L3Q96J77 140 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 OXGR1Q96P68 337 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 NDEL1Q9GZM8 345 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 MS4A5Q9H3V2 200 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 IKZF5Q9H5V7 419 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 B3GAT2Q9NPZ5 323 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 RLIMQ9NVW2 624 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 FBXL3Q9UKT7 428 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 TMCC3Q9ULS5 477 aa8.16□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF443Q9Y2A4 671 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-226ENST00000591534 CMAHPQ9Y471 501 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms