RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 H0YC42 278 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SEC14L5O43304 696 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 OR1F1O43749 312 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 AIREO43918 545 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 GCM2O75603 506 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 ACTL6AO96019 429 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 ADORA3P0DMS8 318 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SMIM10L1P0DMW3 83 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 ANXA8P13928 327 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 GADD45AP24522 165 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 EPHA2P29317 976 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SLC15A1P46059 708 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 UGT2B15P54855 530 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 TPTEP56180 551 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 AP1S2P56377 157 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 DSCR9P59020 149 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 HILS1P60008 231 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 NANOS3P60323 173 aaKnown RBP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 RPS16P62249 146 aaKnown RBP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 RBBP4Q09028 425 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 FUT7Q11130 342 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 PPP1R8Q12972 351 aaKnown RBP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 NTRK2Q16620 822 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 PLA1AQ53H76 456 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 AGAP6Q5VW22 663 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 LIPJQ5W064 366 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 NOXRED1Q6NXP6 359 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 DEF8Q6ZN54 512 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 GALNT5Q7Z7M9 940 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 AKAP14Q86UN6 197 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 PSMA8Q8TAA3 256 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 WDR20Q8TBZ3 569 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 NT5CQ8TCD5 201 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SELENOMQ8WWX9 145 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 PIK3R3Q92569 461 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 PROX1Q92786 737 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 GGHQ92820 318 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 MRPL24Q96A35 216 aaKnown RBP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 COQ8BQ96D53 544 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SMIM10Q96HG1 83 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 WDFY2Q96P53 400 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SNX18Q96RF0 628 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 GAL3ST4Q96RP7 486 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SDHCQ99643 169 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 COPS4Q9BT78 406 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 ALG8Q9BVK2 526 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 TAPBPLQ9BX59 468 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 REEP1Q9H902 201 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 C3orf14Q9HBI5 128 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 ASB6Q9NWX5 421 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 POFUT2Q9Y2G5 429 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 SAMHD1Q9Y3Z3 626 aaKnown RBP6.76□□□□□ -1.33
SMAD4-209ENST00000589941 LYVE1Q9Y5Y7 322 aa6.76□□□□□ -1.33
SMAD4-209ENST00000589941 PNMA8CA0A1B0GUJ8 204 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 LRP5LA4QPB2 252 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 SLC22A20A6NK97 555 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 B4DXG7 233 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 H0YIV9 168 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 SCAMP2O15127 329 aaKnown RBP6.75□□□□□ -1.33
SMAD4-209ENST00000589941 ADAMDEC1O15204 470 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 EMC8O43402 210 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 LDB3O75112 727 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 CATP04040 527 aaKnown RBP6.75□□□□□ -1.33
SMAD4-209ENST00000589941 IGKV3-11P04433 115 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 CRHP06850 196 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF708P17019 499 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 CHMP24386 653 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 GRK5P34947 590 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 NR4A2P43354 598 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 RGS6P49758 472 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 MVDP53602 400 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 CDH11P55287 796 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 CLDN15P56746 228 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 HSD17B7P56937 341 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 RAB38P57729 211 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 PLIN5Q00G26 463 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 SPOCK1Q08629 439 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 DOC2AQ14183 400 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 TIGD6Q17RP2 521 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 FRG2Q64ET8 278 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 ANGPTL8Q6UXH0 198 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 GDPGP1Q6ZNW5 385 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 AHSA2Q719I0 299 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 GDPD3Q7L5L3 318 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 P4HA3Q7Z4N8 544 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 VTCN1Q7Z7D3 282 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 C17orf64Q86WR6 236 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 RNF130Q86XS8 419 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 SNX29P2Q8IUI4 249 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 METTL4Q8N3J2 472 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 PARP16Q8N5Y8 322 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 NUBPLQ8TB37 319 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 TAF15Q92804 592 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMAD4-209ENST00000589941 S100PBPQ96BU1 408 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 ZNF486Q96H40 463 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-209ENST00000589941 TSSK3Q96PN8 268 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 FRG2BQ96QU4 278 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 EGFL8Q99944 293 aa6.75□□□□□ -1.33
SMAD4-209ENST00000589941 OR2B2Q9GZK3 357 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms