RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CENPBD1B2RD01 187 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 M0QX08 132 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 ADH4P08319 380 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 TSPAN19P0C672 248 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 GATA3P23771 443 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 ATP4BP51164 291 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 UGT2B15P54855 530 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 RPL18Q07020 188 aaKnown RBP15.61■□□□□ 0.09
CCDC43-204ENST00000588687 TSTQ16762 297 aaKnown RBP15.61■□□□□ 0.09
CCDC43-204ENST00000588687 SPRNQ5BIV9 151 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 PABPC1L2AQ5JQF8 200 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 TTC33Q6PID6 262 aaPredicted RBP15.61■□□□□ 0.09
CCDC43-204ENST00000588687 NANOGNBQ7Z5D8 188 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 ICA1LQ8NDH6 482 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 OR1J2Q8NGS2 313 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 OR1J1Q8NGS3 322 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 VANGL1Q8TAA9 524 aaPredicted RBP15.61■□□□□ 0.09
CCDC43-204ENST00000588687 NANPQ8TBE9 248 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 TAMM41Q96BW9 452 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 MPP4Q96JB8 637 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 CCDC28BQ9BUN5 200 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 LOC100509620A0A075B734 347 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 TMPRSS2O15393 492 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 ICMTO60725 284 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 TRMUO75648 421 aaKnown RBP15.6■□□□□ 0.09
CCDC43-204ENST00000588687 PRSS23O95084 383 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 SLC2A10O95528 541 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 BCL10O95999 233 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 PTHP01270 115 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 ZNF81P51508 661 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 CLRN1P58418 232 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 MTPNP58546 118 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 MRPS34P82930 218 aaKnown RBP15.6■□□□□ 0.09
CCDC43-204ENST00000588687 HFEQ30201 348 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 AGKQ53H12 422 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 SPATA46Q5T0L3 261 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 ARMC4Q5T2S8 1044 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 RFPL4BQ6ZWI9 263 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 RETREG3Q86VR2 466 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 LRRC18Q8N456 261 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 SYT14Q8NB59 555 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 C22orf15Q8WYQ4 148 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 ELMOD3Q96FG2 381 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 TMBIM4Q9HC24 238 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 DECR2Q9NUI1 292 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 VWFP04275 2813 aa15.6■□□□□ 0.09
CCDC43-204ENST00000588687 PPIAL4EA0A075B759 164 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 PPIAL4CA0A0B4J2A2 164 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 IQCMA0A1B0GVH7 501 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 PPIAL4DF5H284 164 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 F13BP05160 661 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 PPIAL4FP0DN26 164 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 ZNF32P17041 273 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 ZFP36P26651 326 aaKnown RBP15.59■□□□□ 0.09
CCDC43-204ENST00000588687 STOMP27105 288 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 CDAP32320 146 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 PLP2Q04941 152 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 MBNL2Q5VZF2 373 aaKnown RBP15.59■□□□□ 0.09
CCDC43-204ENST00000588687 DHDDSQ86SQ9 333 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 BPIFB2Q8N4F0 458 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 DPP10Q8N608 796 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 DEFB108BQ8NET1 73 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 RAB1CQ92928 201 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 LRRC58Q96CX6 371 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 TIMD4Q96H15 378 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 C1orf147Q96MC9 270 aaPredicted RBP15.59■□□□□ 0.09
CCDC43-204ENST00000588687 GAL3ST1Q99999 423 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 ZNF747Q9BV97 191 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 C7orf69Q9H7B7 122 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 KAT8Q9H7Z6 458 aaKnown RBP15.59■□□□□ 0.09
CCDC43-204ENST00000588687 SIAEQ9HAT2 523 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 DCAF16Q9NXF7 216 aa15.59■□□□□ 0.09
CCDC43-204ENST00000588687 SPRY3O43610 288 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 ACADSP16219 412 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 PCGF2P35227 344 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 APLNRP35414 380 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 RBMXP38159 391 aaKnown RBP15.58■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF84P51523 738 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 LCN2P80188 198 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 FMODQ06828 376 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 CYP51A1Q16850 503 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 THEM4Q5T1C6 240 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 PFN4Q8NHR9 129 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 SLC25A40Q8TBP6 338 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 KLF14Q8TD94 323 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-204ENST00000588687 CCL17Q92583 94 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 CGREF1Q99674 301 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 LRMDAQ9H2I8 198 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 SMURF2Q9HAU4 748 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 C20orf141Q9NUB4 165 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 KLHL21Q9UJP4 597 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 LEF1Q9UJU2 399 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-204ENST00000588687 PCDHGB1Q9Y5G3 927 aa15.58■□□□□ 0.08
CCDC43-204ENST00000588687 NPIPB13A6NJU9 1138 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 NPIPB4C9JG80 1138 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 BLOC1S5-TXNDC5H3BN57 136 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 TPD52L2O43399 206 aaKnown RBP15.57■□□□□ 0.08
CCDC43-204ENST00000588687 IGF2P01344 180 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 MT-ND1P03886 318 aa15.57■□□□□ 0.08
CCDC43-204ENST00000588687 MT-ND5P03915 603 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms