RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 CDX4O14627 284 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 MAGEB4O15481 346 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ICMTO60725 284 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 AHSA1O95433 338 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ANKRD34CP0C6C1 535 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 CDK2P24941 298 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 DLX5P56178 289 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 P2RX3P56373 397 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ARPC4P59998 168 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 GMFBP60983 142 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 DHODHQ02127 395 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ROM1Q03395 351 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 SLC17A1Q14916 467 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 CD226Q15762 336 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 MESTQ5EB52 335 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 CLLU1Q5K131 121 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 SFRP4Q6FHJ7 346 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 GRINAQ7Z429 371 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 CDH26Q8IXH8 852 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 GATSQ8NAP1 163 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 DNAAF1Q8NEP3 725 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 OR11G2Q8NGC1 345 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 OR2T35Q8NGX2 323 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 RNF128Q8TEB7 428 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF721Q8TF20 911 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 CCDC107Q8WV48 283 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 TSEN15Q8WW01 171 aaKnown RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNRF4Q8WWF5 429 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 RGP1Q92546 391 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 TAAR8Q969N4 342 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 MCHR2Q969V1 340 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 FOXRED1Q96CU9 486 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ARSGQ96EG1 525 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 BBC3Q96PG8 261 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF587Q96SQ5 575 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ADOQ96SZ5 270 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 GFI1Q99684 422 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF304Q9HCX3 659 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 MTFP1Q9UDX5 166 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 SLC23A1Q9UHI7 598 aa12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 ASH1LQ9NR48 2969 aaKnown RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 COL5A1P20908 1838 aaPredicted RBP12.69□□□□□ -0.38
NEDD4L-223ENST00000588516 LOC100289279A0A1B0GTE1 492 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 PRSS37A4D1T9 235 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 NPIPB13A6NJU9 1138 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 NPIPB4C9JG80 1138 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 SMLR1H3BR10 107 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 ERVH48-1M5A8F1 160 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 SLC17A2O00624 439 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 ARPC1BO15143 372 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 TSPAN2O60636 221 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 NUDT14O95848 222 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 DDAH2O95865 285 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 HLA-DQA2P01906 255 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 F13BP05160 661 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 AKAIN1P0CW23 69 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 RIDAP52758 137 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 SUMO3P55854 103 aaPredicted RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 PSMA6P60900 246 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 ZNF117Q03924 483 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 EGR4Q05215 589 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 MPPED2Q15777 294 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 TOMM34Q15785 309 aaPredicted RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 SLC25A25Q6KCM7 469 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 DEGS2Q6QHC5 323 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 TTLL10Q6ZVT0 673 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 SYT9Q86SS6 491 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 ZSCAN1Q8NBB4 408 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 ZPLD1Q8TCW7 415 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 TMEM106AQ96A25 262 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 KTI12Q96EK9 354 aaPredicted RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 CITED4Q96RK1 184 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 OR10A4Q9H209 315 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 AUNIPQ9H7T9 357 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 NKIRAS2Q9NYR9 191 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 B9D1Q9UPM9 204 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 DHDHQ9UQ10 334 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 NBEAQ8NFP9 2946 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 ASXL3Q9C0F0 2248 aa12.68□□□□□ -0.38
NEDD4L-223ENST00000588516 TMED7-TICAM2A0A0A6YYA0 188 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 IGHV5-51A0A0C4DH38 117 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 A0A1B0GW55 424 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 A0A1W2PR77 199 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 PATE3B3GLJ2 98 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 M0R233 179 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 NUDT21O43809 227 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DUX1O43812 170 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 SCGNO76038 276 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 CTSBP07858 339 aa12.67□□□□□ -0.38
NEDD4L-223ENST00000588516 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms