RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 KLF14Q8TD94 323 aaPredicted RBP12.87□□□□□ -0.35
IFT20-216ENST00000588477 WFDC12Q8WWY7 111 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.87□□□□□ -0.35
IFT20-216ENST00000588477 MCHR2Q969V1 340 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 PKP2Q99959 881 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 SPATA5L1Q9BVQ7 753 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 OR2J1Q9GZK6 312 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 PAIP1Q9H074 479 aaKnown RBP12.87□□□□□ -0.35
IFT20-216ENST00000588477 RAD21L1Q9H4I0 556 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 EIF3KQ9UBQ5 218 aaKnown RBP12.87□□□□□ -0.35
IFT20-216ENST00000588477 ZDHHC8Q9ULC8 765 aa12.87□□□□□ -0.35
IFT20-216ENST00000588477 MDFIC2A0A1B0GVS7 189 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 IDO1P14902 403 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 LIPAP38571 399 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 WNT5AP41221 380 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 ZNF84P51523 738 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 POLR2JP52435 117 aaKnown RBP12.86□□□□□ -0.35
IFT20-216ENST00000588477 CLRN1P58418 232 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 BST1Q10588 318 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 NRN1LQ496H8 165 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
IFT20-216ENST00000588477 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 KRT73Q86Y46 540 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 OR9I1Q8NGQ6 314 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 KCNN2Q9H2S1 579 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 MMP27Q9H306 513 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 BEX1Q9HBH7 125 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 MSL2Q9HCI7 577 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 CYSLTR2Q9NS75 346 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 TMEM106BQ9NUM4 274 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 KLHL21Q9UJP4 597 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 TRIM33Q9UPN9 1127 aa12.86□□□□□ -0.35
IFT20-216ENST00000588477 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 C5orf49A4QMS7 147 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 FAM181BA6NEQ2 426 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 TRPC5OSA6NMA1 111 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 A8MXK9 166 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
IFT20-216ENST00000588477 CH25HO95992 272 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 IGHG1P01857 330 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 KITP10721 976 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 CD80P33681 288 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 TNFAIP6P98066 277 aaPredicted RBP12.85□□□□□ -0.35
IFT20-216ENST00000588477 PAX8Q06710 450 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 TMEM155Q4W5P6 130 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 ESCO2Q56NI9 601 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 REEP3Q6NUK4 255 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 BRICD5Q6PL45 260 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 SLC2A7Q6PXP3 512 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 UNQ6126/PRO20091Q6UXV3 157 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 LINC00114Q6XXX2 140 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 RANBP3LQ86VV4 465 aaPredicted RBP12.85□□□□□ -0.35
IFT20-216ENST00000588477 LRRC28Q86X40 367 aaPredicted RBP12.85□□□□□ -0.35
IFT20-216ENST00000588477 GTF2H4Q92759 462 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 POM121L2Q96KW2 1035 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 NANSQ9NR45 359 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 TNFRSF19Q9NS68 423 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 OR5V1Q9UGF6 321 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 SLC13A4Q9UKG4 626 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 ZNF281Q9Y2X9 895 aa12.85□□□□□ -0.35
IFT20-216ENST00000588477 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 TRAV40A0A0B4J280 105 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 M0QZ24 198 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 HDAC3O15379 428 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 CRYBA1P05813 215 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 CD55P08174 381 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 ZNF32P17041 273 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 CDK6Q00534 326 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 ZNF74Q16587 644 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
IFT20-216ENST00000588477 GCNT6Q5T4J0 391 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 SWT1Q5T5J6 900 aaKnown RBP12.84□□□□□ -0.35
IFT20-216ENST00000588477 HHATQ5VTY9 493 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 C10orf111Q8N326 155 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 AKR7LQ8NHP1 331 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 ABHD4Q8TB40 342 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 MCHR1Q99705 422 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 CITED1Q99966 193 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 SLC19A3Q9BZV2 496 aa12.84□□□□□ -0.35
IFT20-216ENST00000588477 CGGBP1Q9UFW8 167 aaPredicted RBP12.84□□□□□ -0.35
IFT20-216ENST00000588477 PRORSD1PA6NEY8 169 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 F5H0A9 414 aaPredicted RBP12.83□□□□□ -0.36
IFT20-216ENST00000588477 TIMM23O14925 209 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 MGRN1O60291 552 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 PLATP00750 562 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 NGFP01138 241 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 UMPSP11172 480 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 HOXB9P17482 250 aaPredicted RBP12.83□□□□□ -0.36
IFT20-216ENST00000588477 CDAP32320 146 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 GDI2P50395 445 aaKnown RBP12.83□□□□□ -0.36
IFT20-216ENST00000588477 RAG2P55895 527 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 PPP1CBP62140 327 aa12.83□□□□□ -0.36
IFT20-216ENST00000588477 BTG1P62324 171 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms