RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 LIN52Q52LA3 116 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 AVPI1Q5T686 147 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 LPCAT4Q643R3 524 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 TMEM225Q6GV28 225 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 NIPAL3Q6P499 406 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 MDP1Q86V88 176 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 SIGLECL1Q8N7X8 197 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 PAPD5Q8NDF8 572 aaKnown RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 GPR32P1Q8NGA4 272 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 MS4A5Q9H3V2 200 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 ARMC7Q9H6L4 198 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 POLE3Q9NRF9 147 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 FZR1Q9UM11 496 aa7.33□□□□□ -1.24
SDF2-204ENST00000587338 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
SDF2-204ENST00000587338 A0A1W2PPW3 197 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 LIPT2A6NK58 231 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 FRS3O43559 492 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 CDC14BO60729 498 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 RP2O75695 350 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 SEC14L2O76054 403 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 HOXB6P17509 224 aaKnown RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 NR4A1P22736 598 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 PRTN3P24158 256 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 PEX2P28328 305 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 ARR3P36575 388 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 VHLP40337 213 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 PTDSS1P48651 473 aaKnown RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 EVX1P49640 407 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 RGS8P57771 180 aaPredicted RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 SPIBQ01892 262 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 PLAURQ03405 335 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 PPP1R8Q12972 351 aaKnown RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 ATP6AP1Q15904 470 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 ALKBH6Q3KRA9 238 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 ZNF836Q6ZNA1 936 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 CYP4Z1Q86W10 505 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 GALNT4Q8N4A0 578 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 CNOT9Q92600 299 aaKnown RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 TAF15Q92804 592 aaKnown RBP eCLIP7.32□□□□□ -1.24
SDF2-204ENST00000587338 EME1Q96AY2 570 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 RAB39BQ96DA2 213 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 CENPNQ96H22 339 aaPredicted RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 ZNF347Q96SE7 839 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 VCX3BQ9H321 246 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 C7orf69Q9H7B7 122 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 REEP1Q9H902 201 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 IL1RAPQ9NPH3 570 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 EXOSC3Q9NQT5 275 aaKnown RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 RLIMQ9NVW2 624 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 MYEF2Q9P2K5 600 aaKnown RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 DNAJB9Q9UBS3 223 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 RIMS3Q9UJD0 308 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 SAMHD1Q9Y3Z3 626 aaKnown RBP7.32□□□□□ -1.24
SDF2-204ENST00000587338 NOX1Q9Y5S8 564 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 U3KQV3 271 aa7.32□□□□□ -1.24
SDF2-204ENST00000587338 DSPPQ9NZW4 1301 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 AGAP5A6NIR3 686 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 POM121CA8CG34 1229 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 TMEM229AB2RXF0 380 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 J3KTA2 159 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 SEMG1P04279 462 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 NAT2P11245 290 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 PRKAR1BP31321 381 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 RRM2P31350 389 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 IFNA8P32881 189 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 ARHGDIAP52565 204 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 CDH12P55289 794 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 TAS2R41P59536 307 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 MRPS11P82912 194 aaKnown RBP7.31□□□□□ -1.24
SDF2-204ENST00000587338 MRPL2Q5T653 305 aaKnown RBP7.31□□□□□ -1.24
SDF2-204ENST00000587338 OR2T5Q6IEZ7 315 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 DHRS4L2Q6PKH6 230 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 CREB3L2Q70SY1 520 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 LRP11Q86VZ4 500 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 RBM45Q8IUH3 476 aaKnown RBP7.31□□□□□ -1.24
SDF2-204ENST00000587338 CLIP4Q8N3C7 705 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 IL17RDQ8NFM7 739 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 OR4D11Q8NGI4 311 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 OR2T29Q8NH02 315 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 OR52J3Q8NH60 311 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 NRG4Q8WWG1 115 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 DVL3Q92997 716 aaPredicted RBP7.31□□□□□ -1.24
SDF2-204ENST00000587338 CIB1Q99828 191 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 TAPBPLQ9BX59 468 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 LINC00470Q9BZP3 86 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 VCXQ9H320 206 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 ZMAT3Q9HA38 289 aaKnown RBP7.31□□□□□ -1.24
SDF2-204ENST00000587338 NDUFAF4Q9P032 175 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 RHCGQ9UBD6 479 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 OPN4Q9UHM6 478 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 ENPP4Q9Y6X5 453 aa7.31□□□□□ -1.24
SDF2-204ENST00000587338 CPSF4LA6NMK7 179 aaKnown RBP7.3□□□□□ -1.24
SDF2-204ENST00000587338 G3V2T6 193 aa7.3□□□□□ -1.24
SDF2-204ENST00000587338 TNFRSF11BO00300 401 aa7.3□□□□□ -1.24
SDF2-204ENST00000587338 TPST2O60704 377 aa7.3□□□□□ -1.24
SDF2-204ENST00000587338 ZNF432O94892 652 aa7.3□□□□□ -1.24
SDF2-204ENST00000587338 GADD45GO95257 159 aa7.3□□□□□ -1.24
SDF2-204ENST00000587338 FSHBP01225 129 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms