RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RFPL4BQ6ZWI9 263 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 RANBP3LQ86VV4 465 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 ARMC8Q8IUR7 673 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 LRRC18Q8N456 261 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 RBM15BQ8NDT2 890 aaKnown RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 GEMIN6Q8WXD5 167 aaKnown RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 ELMOD3Q96FG2 381 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 TIMD4Q96H15 378 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 PRSS27Q9BQR3 290 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 CPPED1Q9BRF8 314 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 C1orf198Q9H425 327 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 UNKLQ9H9P5 680 aaKnown RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 NTN4Q9HB63 628 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 SLCO1B3Q9NPD5 702 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 MEPEQ9NQ76 525 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 DECR2Q9NUI1 292 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 UBAP1Q9NZ09 502 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 KLHL21Q9UJP4 597 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 PURGQ9UJV8 347 aaKnown RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 KPNA4O00629 521 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-225ENST00000586385 TPD52L2O43399 206 aaKnown RBP10.03□□□□□ -0.8
BRCA1-225ENST00000586385 RNF13O43567 381 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 ERLIN1O75477 346 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 OR6A2O95222 327 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 FARS2O95363 451 aaKnown RBP10.03□□□□□ -0.8
BRCA1-225ENST00000586385 SLC2A10O95528 541 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 FPR2P25090 351 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 CRYBA2P53672 197 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 ENTPD8Q5MY95 495 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 C10orf128Q5T292 105 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 MBNL2Q5VZF2 373 aaKnown RBP10.03□□□□□ -0.8
BRCA1-225ENST00000586385 DLEU7Q6UYE1 221 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 DPPA2Q7Z7J5 298 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 SYT14Q8NB59 555 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 HIPK4Q8NE63 616 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 NOXO1Q8NFA2 376 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 SLC25A40Q8TBP6 338 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 KLF14Q8TD94 323 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-225ENST00000586385 ASB10Q8WXI3 467 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 POP5Q969H6 163 aaKnown RBP10.03□□□□□ -0.8
BRCA1-225ENST00000586385 OR2J1Q9GZK6 312 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 NANSQ9NR45 359 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF229Q9UJW7 825 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 SLC7A7Q9UM01 511 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 POLR3KQ9Y2Y1 108 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-225ENST00000586385 USH1CQ9Y6N9 552 aa10.03□□□□□ -0.8
BRCA1-225ENST00000586385 IQCMA0A1B0GVH7 501 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ISPDA4D126 451 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ENTPD5O75356 428 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 SERPINB7O75635 380 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 TRMUO75648 421 aaKnown RBP10.02□□□□□ -0.81
BRCA1-225ENST00000586385 NGFP01138 241 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 IGHG1P01857 330 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 F13BP05160 661 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 CD55P08174 381 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ZNF12P17014 697 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ZNF32P17041 273 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 CD247P20963 164 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 DRD4P21917 467 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 SLC6A2P23975 617 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 STOMP27105 288 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 UGT2B15P54855 530 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 MRPS34P82930 218 aaKnown RBP10.02□□□□□ -0.81
BRCA1-225ENST00000586385 PSG4Q00888 419 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 FMODQ06828 376 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 RPL18Q07020 188 aaKnown RBP10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ZNF154Q13106 437 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 SELPLGQ14242 412 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ARMC4Q5T2S8 1044 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 OR1J2Q8NGS2 313 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ADAMTS16Q8TE57 1224 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 SPDL1Q96EA4 605 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 ZNF607Q96SK3 696 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 EBF4Q9BQW3 602 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 PARD6BQ9BYG5 372 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 MSL2Q9HCI7 577 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 PLEK2Q9NYT0 353 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 NUP50Q9UKX7 468 aa10.02□□□□□ -0.81
BRCA1-225ENST00000586385 C5orf49A4QMS7 147 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 F5H0A9 414 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-225ENST00000586385 M0QX08 132 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 ICMTO60725 284 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 FOXH1O75593 365 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 PTHP01270 115 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 IGHMP01871 453 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 RNASE1P07998 156 aaKnown RBP10.01□□□□□ -0.81
BRCA1-225ENST00000586385 TSPAN19P0C672 248 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 CCNOP22674 350 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 PPIBP23284 216 aaKnown RBP10.01□□□□□ -0.81
BRCA1-225ENST00000586385 APLNRP35414 380 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 SLC6A9P48067 706 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 CLRN1P58418 232 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 PAX2Q02962 417 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 HSF2Q03933 536 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 PLP2Q04941 152 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 SLC9A3R2Q15599 337 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 MOGQ16653 247 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 ZNF718Q3SXZ3 478 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms