RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 VWA1Q6PCB0 445 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 ZNF773Q6PK81 442 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 LYPD4Q6UWN0 246 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 ZNF627Q7L945 461 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 PRSS48Q7RTY5 328 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 ZNF100Q8IYN0 542 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 ZNF511Q8NB15 262 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 OR51G2Q8NGK0 314 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 NSMAFQ92636 917 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 MYDGFQ969H8 173 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 CNN2Q99439 309 aaKnown RBP14.23□□□□□ -0.13
SS18-226ENST00000585241 CRLF2Q9HC73 371 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 PLSCR4Q9NRQ2 329 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 PCDHGB1Q9Y5G3 927 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 COMMD3-BMI1R4GMX3 469 aa14.23□□□□□ -0.13
SS18-226ENST00000585241 INTS1Q8N201 2190 aaKnown RBP14.23□□□□□ -0.13
SS18-226ENST00000585241 PTGES3LE9PB15 166 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 RGS10O43665 173 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 RAB36O95755 333 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 TFP02787 698 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 RPSAP08865 295 aaKnown RBP14.22□□□□□ -0.13
SS18-226ENST00000585241 SMIM18P0DKX4 95 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 CD8BP10966 210 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 CTSSP25774 331 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 ZNF84P51523 738 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 CASP6P55212 293 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 SIRPAP78324 504 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 MRPS34P82930 218 aaKnown RBP14.22□□□□□ -0.13
SS18-226ENST00000585241 ROR2Q01974 943 aaKnown RBP14.22□□□□□ -0.13
SS18-226ENST00000585241 IRF3Q14653 427 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 TMEM211Q6ICI0 200 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 C3P1Q6ZMU1 363 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 SLC16A9Q7RTY1 509 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.22□□□□□ -0.13
SS18-226ENST00000585241 ABHD12BQ7Z5M8 362 aaPredicted RBP14.22□□□□□ -0.13
SS18-226ENST00000585241 OR4F15Q8NGB8 312 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 NABP1Q96AH0 204 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 STARD4Q96DR4 205 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 ZNF837Q96EG3 531 aaPredicted RBP14.22□□□□□ -0.13
SS18-226ENST00000585241 TMEM80Q96HE8 168 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 INTS14Q96SY0 518 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 MNTQ99583 582 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 ZNF649Q9BS31 505 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 CDCA4Q9BXL8 241 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 RERGLQ9H628 205 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 C12orf49Q9H741 205 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 POLE4Q9NR33 117 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 INPP5EQ9NRR6 644 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 ERVK-18Q9QC07 812 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 PRSS50Q9UI38 385 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 KCNG2Q9UJ96 466 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 MEMO1Q9Y316 297 aa14.22□□□□□ -0.13
SS18-226ENST00000585241 TVP23AA6NH52 213 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 HSPB2A8KAH6 182 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 ZNF587BE7ETH6 402 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 SELENOFO60613 162 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 GPANK1O95872 356 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 C21orf33P30042 268 aaPredicted RBP14.21□□□□□ -0.13
SS18-226ENST00000585241 CDH15P55291 814 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 ACTC1P68032 377 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 ACTA1P68133 377 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 TUBA4AP68366 448 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 MVKQ03426 396 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 HSPB2Q16082 182 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 CEACAM16Q2WEN9 425 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 BTLAQ7Z6A9 289 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 STX19Q8N4C7 294 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 CNEP1R1Q8N9A8 125 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 GALNT11Q8NCW6 608 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 TSPAN14Q8NG11 270 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 C11orf40Q8WZ69 217 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 YIPF3Q9GZM5 350 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 NELFAQ9H3P2 528 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 TMEM38BQ9NVV0 291 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 ZFYVE26Q68DK2 2539 aa14.21□□□□□ -0.13
SS18-226ENST00000585241 A0A087WXM4 84 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 TRGV8A0A0C4DH27 118 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 A0A0G2JNJ9 132 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 A0A1W2PPL8 197 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 ZNF99A8MXY4 864 aaPredicted RBP14.2□□□□□ -0.14
SS18-226ENST00000585241 APOL3O95236 402 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 IGHV3-9P01782 118 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 MT-ND2P03891 347 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 SCG5P05408 212 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 MRPL3P09001 348 aaKnown RBP14.2□□□□□ -0.14
SS18-226ENST00000585241 OR2T7P0C7T2 308 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 NPR2P20594 1047 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 MSR1P21757 451 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 EEF1B2P24534 225 aaKnown RBP14.2□□□□□ -0.14
SS18-226ENST00000585241 NAA10P41227 235 aaPredicted RBP14.2□□□□□ -0.14
SS18-226ENST00000585241 ENTPD1P49961 510 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 SH3BGRP55822 239 aaPredicted RBP14.2□□□□□ -0.14
SS18-226ENST00000585241 LSM6P62312 80 aaKnown RBP14.2□□□□□ -0.14
SS18-226ENST00000585241 PIGFQ07326 219 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 PMPCAQ10713 525 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 Q6ZT83 130 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 SHFQ7M4L6 423 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 CDC20BQ86Y33 519 aa14.2□□□□□ -0.14
SS18-226ENST00000585241 ERI1Q8IV48 349 aaKnown RBP14.2□□□□□ -0.14
SS18-226ENST00000585241 SLC35F2Q8IXU6 374 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms