RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 MELKQ14680 651 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 RBM45Q8IUH3 476 aaKnown RBP12.8□□□□□ -0.36
VAPA-209ENST00000585042 PAQR4Q8N4S7 273 aaPredicted RBP12.8□□□□□ -0.36
VAPA-209ENST00000585042 OR4D11Q8NGI4 311 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 PRSS27Q9BQR3 290 aa12.8□□□□□ -0.36
VAPA-209ENST00000585042 MEPEQ9NQ76 525 aaPredicted RBP12.8□□□□□ -0.36
VAPA-209ENST00000585042 GMNCA6NCL1 334 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 TRIM77I1YAP6 450 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 SLC22A2O15244 555 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 CCDC22O60826 627 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 CCL2P13500 99 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 FUT1P19526 365 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 DRD4P21917 467 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 LIPAP38571 399 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 UGT2B15P54855 530 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 MTPNP58546 118 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 HILS1P60008 231 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 RUNX1T1Q06455 604 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
VAPA-209ENST00000585042 SF3A3Q12874 501 aaKnown RBP eCLIP12.79□□□□□ -0.362e-20■■■■□ 20.6
VAPA-209ENST00000585042 NFYCQ13952 458 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 CYLC2Q14093 348 aaPredicted RBP12.79□□□□□ -0.36
VAPA-209ENST00000585042 VMACQ2NL98 169 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 HFEQ30201 348 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 ZNF718Q3SXZ3 478 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 CPEB3Q8NE35 698 aaKnown RBP12.79□□□□□ -0.36
VAPA-209ENST00000585042 NOXO1Q8NFA2 376 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 VANGL1Q8TAA9 524 aaPredicted RBP12.79□□□□□ -0.36
VAPA-209ENST00000585042 ASB10Q8WXI3 467 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 RAB1CQ92928 201 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 TAMM41Q96BW9 452 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 ZMYND19Q96E35 227 aaPredicted RBP12.79□□□□□ -0.36
VAPA-209ENST00000585042 TIMD4Q96H15 378 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 ZNF347Q96SE7 839 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 SH3GL1Q99961 368 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 LPAR2Q9HBW0 351 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 INIPQ9NRY2 104 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 EIF3KQ9UBQ5 218 aaKnown RBP12.79□□□□□ -0.36
VAPA-209ENST00000585042 BAG5Q9UL15 447 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 CAPN7Q9Y6W3 813 aa12.79□□□□□ -0.36
VAPA-209ENST00000585042 A0A0G2JMP0 313 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 A0A0X1KG70 313 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 TMEM89A2RUT3 159 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 BBIP1A8MTZ0 92 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 CLDN25C9JDP6 229 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 MCIDASD6RGH6 385 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 H3BSA7 217 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 KPNA4O00629 521 aaPredicted RBP12.78□□□□□ -0.36
VAPA-209ENST00000585042 PLPP2O43688 288 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 CDC14BO60729 498 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 DEAF1O75398 565 aaPredicted RBP12.78□□□□□ -0.36
VAPA-209ENST00000585042 TRMUO75648 421 aaKnown RBP12.78□□□□□ -0.36
VAPA-209ENST00000585042 OR7A10O76100 309 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 MPZL1O95297 269 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 NPPAP01160 153 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 ADH4P08319 380 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 THRBP10828 461 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 EPHA1P21709 976 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 STOMP27105 288 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 LIMS1P48059 325 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 GZMMP51124 257 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 HSF2Q03933 536 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 SLC3A1Q07837 685 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 KLF10Q13118 480 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 SELPLGQ14242 412 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 TAF11Q15544 211 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 ALKBH6Q3KRA9 238 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 COQ5Q5HYK3 327 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 CGB2Q6NT52 195 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
VAPA-209ENST00000585042 C1QL2Q7Z5L3 287 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 CPLX4Q7Z7G2 160 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 RETREG3Q86VR2 466 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 TSPYL5Q86VY4 417 aaPredicted RBP12.78□□□□□ -0.36
VAPA-209ENST00000585042 PCYOX1LQ8NBM8 494 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 OR4M2Q8NGB6 313 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 OR1J1Q8NGS3 322 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 OR10A6Q8NH74 314 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 FNDC8Q8TC99 324 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 ELMOD3Q96FG2 381 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 TSPAN32Q96QS1 320 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 RBM4Q9BWF3 364 aaKnown RBP12.78□□□□□ -0.36
VAPA-209ENST00000585042 NANOGQ9H9S0 305 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 CCNB1IP1Q9NPC3 277 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 SAR1AQ9NR31 198 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 CYSLTR2Q9NS75 346 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
VAPA-209ENST00000585042 TENM1Q9UKZ4 2725 aa12.78□□□□□ -0.36
VAPA-209ENST00000585042 TPD52L2O43399 206 aaKnown RBP12.77□□□□□ -0.37
VAPA-209ENST00000585042 ICMTO60725 284 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 OR5F1O95221 314 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 IFNA14P01570 189 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 IGHV2-5P01817 119 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 F13BP05160 661 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 GCH1P30793 250 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 ZNF81P51508 661 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 ERVS71-1P61550 626 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 MVKQ03426 396 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 PABPC1L2AQ5JQF8 200 aa12.77□□□□□ -0.37
VAPA-209ENST00000585042 ARMC4Q5T2S8 1044 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms