RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 HSPA14Q0VDF9 509 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 KLRB1Q12918 225 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CRMP1Q14194 572 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 BCL2A1Q16548 175 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF74Q16587 644 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OR4C11Q6IEV9 310 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TRIM40Q6P9F5 258 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM220Q6QAJ8 160 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OPN5Q6U736 354 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SPESP1Q6UW49 350 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ZYG11AQ6WRX3 759 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 LRRC74BQ6ZQY2 392 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM92BQ6ZTR7 304 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FOXRED2Q8IWF2 684 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF679Q8IYX0 411 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 NUBPLQ8TB37 319 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SSC4DQ8WTU2 575 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 APOBEC4Q8WW27 367 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 DNAJC9Q8WXX5 260 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TFGQ92734 400 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CIDECQ96AQ7 238 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 GIMAP5Q96F15 307 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CHP1Q99653 195 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CCDC28BQ9BUN5 200 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52A5Q9H2C5 316 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC40A1Q9NP59 571 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM30AQ9NV96 361 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC39A1Q9NY26 324 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 IKZF2Q9UKS7 526 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TRAV17A0A0B4J275 112 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PPIAL4CA0A0B4J2A2 164 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GOLGA6L7A0A1B0GV03 622 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM240BA0A1B0GVZ2 78 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OR6C74A6NCV1 312 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 BBIP1A8MTZ0 92 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PDZK1P1A8MUH7 402 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CCSO14618 274 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF195O14628 629 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SNAP91O60641 907 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 HCN1O60741 890 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CTSVO60911 334 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SDC3O75056 442 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TRIM3O75382 744 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 EML2O95834 649 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 IFNA14P01570 189 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SERPINA7P05543 415 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FGF4P08620 206 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 IGFBP1P08833 259 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PPIAL4GP0DN37 164 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GABRA1P14867 456 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GPX3P22352 226 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 GPR183P32249 361 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FUT6P51993 359 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 BNC1Q01954 994 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TGFBIQ15582 683 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 CHRNA6Q15825 494 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 HSP90B2PQ58FF3 399 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SEL1L3Q68CR1 1132 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM215Q68D42 235 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52E8Q6IFG1 317 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 MED27Q6P2C8 311 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 HOGA1Q86XE5 327 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TRAPPC5Q8IUR0 188 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NAGSQ8N159 534 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC35F6Q8N357 371 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ZADH2Q8N4Q0 377 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PRR26Q8N8Z3 221 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 PRELID2Q8N945 189 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RELL2Q8NC24 303 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF675Q8TD23 568 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 HAVCR2Q8TDQ0 301 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 RASD2Q96D21 266 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPL53Q96EL3 112 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TNFRSF13CQ96RJ3 184 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF382Q96SR6 550 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NDUFAF3Q9BU61 184 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 Q9H8V8 135 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 MRPS30Q9NP92 439 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ADAP2Q9NPF8 381 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 IL26Q9NPH9 171 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SDR39U1Q9NRG7 319 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 C20orf96Q9NUD7 363 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 INTS9Q9NV88 658 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NKIRAS1Q9NYS0 192 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TAS2R7Q9NYW3 318 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM216Q9P0N5 145 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ENOPH1Q9UHY7 261 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ELF5Q9UKW6 265 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 EIF3LQ9Y262 564 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 DLGAP4Q9Y2H0 992 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 KLF13Q9Y2Y9 288 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 LRRK1Q38SD2 2015 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 AKAP13Q12802 2813 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 TP53BP1Q12888 1972 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A0D9SEW6 157 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SPAARA0A1B0GVQ0 90 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1W2PNV4 684 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 XKRY2A2RUG3 117 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 SUPT3HB4E1H0 165 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 FCN1O00602 326 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms