RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 TXLNGYQ9BZA5 131 aa11.82□□□□□ -0.52
CSNK1D-224ENST00000584672 PRDM13Q9H4Q3 707 aa11.82□□□□□ -0.52
CSNK1D-224ENST00000584672 C12orf10Q9HB07 376 aa11.82□□□□□ -0.52
CSNK1D-224ENST00000584672 MRPL39Q9NYK5 338 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-224ENST00000584672 IL20RAQ9UHF4 553 aa11.82□□□□□ -0.52
CSNK1D-224ENST00000584672 IFT52Q9Y366 437 aa11.82□□□□□ -0.52
CSNK1D-224ENST00000584672 ITM2AO43736 263 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 TIMM8AO60220 97 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 ENTPD5O75356 428 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 CD55P08174 381 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 ADH4P08319 380 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 MMP7P09237 267 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 QDPRP09417 244 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 WNT2P09544 360 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 STOMP27105 288 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 IL12AP29459 219 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 MDH2P40926 338 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 FGF12P61328 243 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 PPP1CBP62140 327 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 WHAMMP3Q1A5X7 153 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 GTDC1Q4AE62 458 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 RUNDC3AQ59EK9 446 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 VAX1Q5SQQ9 334 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 KPRPQ5T749 579 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 FAM205BPQ63HN1 556 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 ZNF283Q8N7M2 679 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 ZNF781Q8N8C0 355 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 OR2Z1Q8NG97 314 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 AKR7LQ8NHP1 331 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 ZNF566Q969W8 418 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 EPYCQ99645 322 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 NOX4Q9NPH5 578 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 CYSLTR2Q9NS75 346 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 EIF3KQ9UBQ5 218 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 ZDHHC8Q9ULC8 765 aa11.81□□□□□ -0.52
CSNK1D-224ENST00000584672 LOC100509620A0A075B734 347 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 A0A0G2JPF8 293 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 HNRNPCL2B2RXH8 293 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 HNRNPCL3B7ZW38 293 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 HNRNPCL1O60812 293 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 OR6A2O95222 327 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 IGHV4-59P01825 116 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 NUDT7P0C024 238 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 HNRNPCL4P0DMR1 293 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 MBNL2Q5VZF2 373 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 ZNF774Q6NX45 483 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 KLBQ86Z14 1044 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 OR5J2Q8NH18 312 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 OR6X1Q8NH79 312 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 MAL2Q969L2 176 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 ZNF347Q96SE7 839 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 NUDT16L1Q9BRJ7 211 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 PCGF1Q9BSM1 259 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 RASSF4Q9H2L5 321 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 SELENONQ9NZV5 590 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 PPP1R3CQ9UQK1 317 aa11.8□□□□□ -0.52
CSNK1D-224ENST00000584672 RFXANKO14593 260 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 RNF13O43567 381 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 SFTPBP07988 381 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 ALDOCP09972 364 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 PGA4P0DJD7 388 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 PGA3P0DJD8 388 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 ZNF32P17041 273 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 SERPINB5P36952 375 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 GDI2P50395 445 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 LOXL3P58215 753 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 CLRN1P58418 232 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 NCALDP61601 193 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 ZMAT1Q5H9K5 638 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 MTX3Q5HYI7 312 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 C11orf87Q6NUJ2 197 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 ULK3Q6PHR2 472 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 Q6ZSV7 163 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 REC114Q7Z4M0 266 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 DPPA2Q7Z7J5 298 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 TMEM86BQ8N661 226 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 SSMEM1Q8WWF3 244 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 DYRK2Q92630 601 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 VPS33AQ96AX1 596 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 THOC1Q96FV9 657 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 FAM71F1Q96KD3 344 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 POM121L2Q96KW2 1035 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 CDADC1Q9BWV3 514 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 SLC19A3Q9BZV2 496 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 GRPEL1Q9HAV7 217 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 CCNB1IP1Q9NPC3 277 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 KLHL21Q9UJP4 597 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 POMT1Q9Y6A1 747 aa11.79□□□□□ -0.52
CSNK1D-224ENST00000584672 IGHV3-64DA0A0J9YX35 117 aa11.78□□□□□ -0.52
CSNK1D-224ENST00000584672 KIR2DS1A0A191URI9 304 aa11.78□□□□□ -0.52
CSNK1D-224ENST00000584672 TLDC2A0PJX2 215 aa11.78□□□□□ -0.52
CSNK1D-224ENST00000584672 C5orf63A6NC05 138 aa11.78□□□□□ -0.52
CSNK1D-224ENST00000584672 TMEM247A6NEH6 219 aa11.78□□□□□ -0.52
CSNK1D-224ENST00000584672 TMEM178BH3BS89 294 aa11.78□□□□□ -0.52
CSNK1D-224ENST00000584672 CYB5R3P00387 301 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms