RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ZNF566Q969W8 418 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ARHGDIGQ99819 225 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 SH3GL3Q99963 347 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 SPATA9Q9BWV2 254 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 TMEM165Q9HC07 324 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 MAN2C1Q9NTJ4 1040 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 PSMC3IPQ9P2W1 217 aaPredicted RBP9.3□□□□□ -0.92
CASC3-208ENST00000583649 IL19Q9UHD0 177 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 ZNF443Q9Y2A4 671 aaPredicted RBP9.3□□□□□ -0.92
CASC3-208ENST00000583649 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
CASC3-208ENST00000583649 SHOX2O60902 331 aaPredicted RBP9.29□□□□□ -0.92
CASC3-208ENST00000583649 FZD7O75084 574 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 SERPINI2O75830 405 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 TSPAN9O75954 239 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 KRT75O95678 551 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 MPIG6BO95866 241 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 VIMP08670 466 aaKnown RBP9.29□□□□□ -0.92
CASC3-208ENST00000583649 ABHD2P08910 425 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 GSTM3P21266 225 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 CBLP22681 906 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 TUBG1P23258 451 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 PAX2Q02962 417 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 EMX1Q04741 257 aaPredicted RBP9.29□□□□□ -0.92
CASC3-208ENST00000583649 EGR4Q05215 589 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 CD69Q07108 199 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 DCTN2Q13561 401 aaKnown RBP9.29□□□□□ -0.92
CASC3-208ENST00000583649 SMU1Q2TAY7 513 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 SPATA46Q5T0L3 261 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 METTL11BQ5VVY1 283 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 ZNF836Q6ZNA1 936 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 Q6ZSV7 163 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 VRK2Q86Y07 508 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 C1orf87Q8N0U7 546 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 OR2Z1Q8NG97 314 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 OR4K5Q8NGD3 323 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 SLC25A40Q8TBP6 338 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 MARS2Q96GW9 593 aaKnown RBP9.29□□□□□ -0.92
CASC3-208ENST00000583649 OR2J1Q9GZK6 312 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 MSL2Q9HCI7 577 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 TUBG2Q9NRH3 451 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 THUMPD1Q9NXG2 353 aaKnown RBP9.29□□□□□ -0.92
CASC3-208ENST00000583649 EMCNQ9ULC0 261 aa9.29□□□□□ -0.92
CASC3-208ENST00000583649 TET2Q6N021 2002 aaPredicted RBP9.29□□□□□ -0.92
CASC3-208ENST00000583649 C5orf49A4QMS7 147 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 MS4A18H0YCH9 400 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 PHYHO14832 338 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 PLIN3O60664 434 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 TOX4O94842 621 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 HLA-DOBP13765 273 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 EPHA3P29320 983 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 GABRA5P31644 462 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 CRATP43155 626 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 IER3P46695 156 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 PITPNBP48739 271 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 NPY4RP50391 375 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 CLNS1AP54105 237 aaKnown RBP9.28□□□□□ -0.92
CASC3-208ENST00000583649 BIDP55957 195 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 NCALDP61601 193 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 PPP1CBP62140 327 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 EMX2Q04743 252 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 CDK5R2Q13319 367 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 TAF11Q15544 211 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 MS4A18Q3C1V0 323 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 ALG10BQ5I7T1 473 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 LDLRAD3Q86YD5 345 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 OR6X1Q8NH79 312 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 ABHD4Q8TB40 342 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 AGR3Q8TD06 166 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 IFT81Q8WYA0 676 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 TXNDC15Q96J42 360 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 C3orf30Q96M34 536 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 PANX1Q96RD7 426 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 MRPL39Q9NYK5 338 aaKnown RBP9.28□□□□□ -0.92
CASC3-208ENST00000583649 GIMAP2Q9UG22 337 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 USH1CQ9Y6N9 552 aa9.28□□□□□ -0.92
CASC3-208ENST00000583649 LOC100653049A0A140TA62 436 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 CCDC154A6NI56 674 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 TMEM178BH3BS89 294 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 COPEO14579 308 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 KRT34O76011 436 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 MT-ATP6P00846 226 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 IGHV4-59P01825 116 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 IRF2P14316 349 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 S100A3P33764 101 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 SERPINB5P36952 375 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 MPV17P39210 176 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 CLRN1P58418 232 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 CKAP4Q07065 602 aaKnown RBP9.27□□□□□ -0.93
CASC3-208ENST00000583649 KCNJ8Q15842 424 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 UGT3A2Q3SY77 523 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 C11orf87Q6NUJ2 197 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 ULK3Q6PHR2 472 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 SERPINA11Q86U17 422 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 C10orf107Q8IVU9 208 aa9.27□□□□□ -0.93
CASC3-208ENST00000583649 LRRC18Q8N456 261 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms