RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 OR6A2O95222 327 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 PNPP00491 289 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 BAMBIQ13145 260 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 EMC4Q5J8M3 183 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 ZNF660Q6AZW8 331 aaPredicted RBP12.37□□□□□ -0.43
RNF43-205ENST00000581868 RELL2Q8NC24 303 aaPredicted RBP12.37□□□□□ -0.43
RNF43-205ENST00000581868 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 NRSN2Q9GZP1 204 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 MTIF3Q9H2K0 278 aaKnown RBP12.37□□□□□ -0.43
RNF43-205ENST00000581868 SPTBN5Q9NRC6 3674 aaKnown RBP12.37□□□□□ -0.43
RNF43-205ENST00000581868 LOC100289279A0A1B0GTE1 492 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 SLC22A23A1A5C7 686 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 SNAPC5O75971 98 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 WISP1O95388 367 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 SEMA4FO95754 770 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 WNT11O96014 354 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 CXCR1P25024 350 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 ETFDHQ16134 617 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 TMEM205Q6UW68 189 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 NDUFAF7Q7L592 441 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 MDGA2Q7Z553 956 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 PDZD9Q8IXQ8 264 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 FAM160A2Q8N612 972 aaPredicted RBP12.37□□□□□ -0.43
RNF43-205ENST00000581868 ZNF454Q8N9F8 522 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 CLEC1AQ8NC01 280 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 METTL21AQ8WXB1 218 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 SHARPINQ9H0F6 387 aa12.37□□□□□ -0.43
RNF43-205ENST00000581868 ZNF230Q9UIE0 474 aaPredicted RBP12.37□□□□□ -0.43
RNF43-205ENST00000581868 YBX2Q9Y2T7 364 aaKnown RBP12.37□□□□□ -0.43
RNF43-205ENST00000581868 TRIM77I1YAP6 450 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 SLC17A2O00624 439 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 SLC16A7O60669 478 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 RABIFP47224 123 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 SCAND1P57086 179 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 BIKQ13323 160 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 ARSKQ6UWY0 536 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 OR1J4Q8NGS1 313 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 LHFPL5Q8TAF8 219 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 OR8B4Q96RC9 309 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 CCNL2Q96S94 520 aaPredicted RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 EXOSC3Q9NQT5 275 aaKnown RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 CGGBP1Q9UFW8 167 aaPredicted RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 GMEB2Q9UKD1 530 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 A8MXK9 166 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 ICOSLGO75144 302 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 NSA2O95478 260 aaKnown RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 RAB3DO95716 219 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 IL33O95760 270 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 RLN2P04090 185 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 CSN2P05814 226 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 HSD17B7P56937 341 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 ZNF117Q03924 483 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 MFGE8Q08431 387 aaPredicted RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 SQSTM1Q13501 440 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 C9orf50Q5SZB4 431 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 ASPHD2Q6ICH7 369 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 CDH26Q8IXH8 852 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 OR1S1Q8NH92 325 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 PTPMT1Q8WUK0 201 aaPredicted RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 MNTQ99583 582 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 TINAGL1Q9GZM7 467 aaPredicted RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 ZC4H2Q9NQZ6 224 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 GPR160Q9UJ42 338 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 DHDHQ9UQ10 334 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 FARSAQ9Y285 508 aaKnown RBP12.36□□□□□ -0.43
RNF43-205ENST00000581868 HS3ST3A1Q9Y663 406 aa12.36□□□□□ -0.43
RNF43-205ENST00000581868 DCDC2BA2VCK2 349 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 TPPPO94811 219 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 OR4E1P0C645 316 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 THEGLP0DJG4 465 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 GLYATL3Q5SZD4 288 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 MARCH3Q86UD3 253 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 NAXDQ8IW45 347 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 GALNT16Q8N428 558 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 BVESQ8NE79 360 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 ZNF578Q96N58 590 aaPredicted RBP12.35□□□□□ -0.43
RNF43-205ENST00000581868 MED9Q9NWA0 146 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 SOHLH2Q9NX45 425 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 TAS2R4Q9NYW5 299 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 EYSQ5T1H1 3165 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 TMEM82A0PJX8 343 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 PHYHO14832 338 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 BET1O15155 118 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 AMY2AP04746 511 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 LIPCP11150 499 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 ACHEP22303 614 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 FNTBP49356 437 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 SLC37A1P57057 533 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 FZD2Q14332 565 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 SCGB2B2Q4G0G5 96 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 TMEM225Q6GV28 225 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 OR10K2Q6IF99 312 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 CFAP77Q6ZQR2 320 aa12.35□□□□□ -0.43
RNF43-205ENST00000581868 C17orf107Q6ZR85 190 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms