RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 BLVRAP53004 296 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 SH3BGRP55822 239 aaPredicted RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 CLRN1P58418 232 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 ROR2Q01974 943 aaKnown RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.65□□□□□ -0.22
SS18-216ENST00000580751 LGALS3BPQ08380 585 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 KRR1Q13601 381 aaKnown RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 SLC35D3Q5M8T2 416 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 LAIR2Q6ISS4 152 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 MEX3BQ6ZN04 569 aaKnown RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 CXXC5Q7LFL8 322 aaKnown RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 BHLHA15Q7RTS1 189 aaPredicted RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 JAZF1Q86VZ6 243 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 DMRTC2Q8IXT2 367 aaPredicted RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 NPEPL1Q8NDH3 523 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 C1orf162Q8NEQ5 155 aaPredicted RBP13.65□□□□□ -0.22
SS18-216ENST00000580751 OR52E2Q8NGJ4 325 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 CNIH3Q8TBE1 160 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 UBE2FQ969M7 185 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 Q96M85 177 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 IL4I1Q96RQ9 567 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 ALG12Q9BV10 488 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 ULBP2Q9BZM5 246 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 DUSP21Q9H596 190 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 HAO2Q9NYQ3 351 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 GLTPQ9NZD2 209 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 NDRG3Q9UGV2 375 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 MOKQ9UQ07 419 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 ADAM18Q9Y3Q7 739 aa13.65□□□□□ -0.22
SS18-216ENST00000580751 PKDREJQ9NTG1 2253 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 TEX13CA0A0J9YWL9 993 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 CIB4A0PJX0 185 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 RPL36A-HNRNPH2H7BZ11 118 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 LYZL6O75951 148 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 RENP00797 406 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 ITGA5P08648 1049 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 COX6B1P14854 86 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 HTR1FP30939 366 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 ACVR1BP36896 505 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 KIR2DL3P43628 341 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 STK11Q15831 433 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 SLC35F1Q5T1Q4 408 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 OR7E24Q6IFN5 339 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 CPOQ8IVL8 374 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 WDFY1Q8IWB7 410 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 ZNF433Q8N7K0 673 aaPredicted RBP13.64□□□□□ -0.23
SS18-216ENST00000580751 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 ZNF582Q96NG8 517 aaPredicted RBP13.64□□□□□ -0.23
SS18-216ENST00000580751 MRPL13Q9BYD1 178 aaKnown RBP13.64□□□□□ -0.23
SS18-216ENST00000580751 NMNAT2Q9BZQ4 307 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 ACTR6Q9GZN1 396 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 CRLF2Q9HC73 371 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 GPR35Q9HC97 309 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 HINT3Q9NQE9 182 aaKnown RBP13.64□□□□□ -0.23
SS18-216ENST00000580751 VSX1Q9NZR4 365 aaPredicted RBP13.64□□□□□ -0.23
SS18-216ENST00000580751 WARS2Q9UGM6 360 aaKnown RBP13.64□□□□□ -0.23
SS18-216ENST00000580751 PSORS1C1Q9UIG5 152 aa13.64□□□□□ -0.23
SS18-216ENST00000580751 UNC79Q9P2D8 2635 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 PRSS37A4D1T9 235 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 ENTPD6O75354 484 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 TRMUO75648 421 aaKnown RBP13.63□□□□□ -0.23
SS18-216ENST00000580751 RAD51DO75771 328 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 CRABP1P29762 137 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 SLC15A1P46059 708 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 TUBA4AP68366 448 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 SLC35A2P78381 396 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 RUNX1T1Q06455 604 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 POU4F2Q12837 409 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 CRMP1Q14194 572 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 HIST3H3Q16695 136 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 CEACAM16Q2WEN9 425 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 KLHL22Q53GT1 634 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 MESTQ5EB52 335 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 LCN1P1Q5VSP4 162 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 C9orf135Q5VTT2 229 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 SP5Q6BEB4 398 aaPredicted RBP13.63□□□□□ -0.23
SS18-216ENST00000580751 DNM1P34Q6PK57 102 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 MEPCEQ7L2J0 689 aaKnown RBP13.63□□□□□ -0.23
SS18-216ENST00000580751 SSX8Q7RTT4 187 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 P2RY8Q86VZ1 359 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 BPIFB6Q8NFQ5 453 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 OR2T4Q8NH00 348 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 OR4K13Q8NH42 304 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 PTP4A1Q93096 173 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 MYDGFQ969H8 173 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 S100PBPQ96BU1 408 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 KCNK17Q96T54 332 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 MED18Q9BUE0 208 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 FKBP14Q9NWM8 211 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 PCDHGB5Q9Y5G0 923 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 PCDHGB1Q9Y5G3 927 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 FKBP7Q9Y680 259 aa13.63□□□□□ -0.23
SS18-216ENST00000580751 A0A087WXM4 84 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 ZNF99A8MXY4 864 aaPredicted RBP13.62□□□□□ -0.23
SS18-216ENST00000580751 FAM20BO75063 409 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 SLC2A10O95528 541 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 HOXC12P31275 282 aa13.62□□□□□ -0.23
SS18-216ENST00000580751 CDKN2AP42771 156 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms