RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 PARP8Q8N3A8 854 aa16.09■□□□□ 0.17
NDEL1-209ENST00000580738 KLHL36Q8N4N3 616 aa16.09■□□□□ 0.17
NDEL1-209ENST00000580738 KLF14Q8TD94 323 aaPredicted RBP16.09■□□□□ 0.17
NDEL1-209ENST00000580738 ROPN1BQ9BZX4 212 aaPredicted RBP16.09■□□□□ 0.17
NDEL1-209ENST00000580738 PAIP1Q9H074 479 aaKnown RBP16.09■□□□□ 0.17
NDEL1-209ENST00000580738 ROPN1Q9HAT0 212 aaPredicted RBP16.09■□□□□ 0.17
NDEL1-209ENST00000580738 KLHL21Q9UJP4 597 aa16.09■□□□□ 0.17
NDEL1-209ENST00000580738 TRIM33Q9UPN9 1127 aa16.09■□□□□ 0.17
NDEL1-209ENST00000580738 LOC100509620A0A075B734 347 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 FAM181BA6NEQ2 426 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 HOXA3O43365 443 aaPredicted RBP16.08■□□□□ 0.16
NDEL1-209ENST00000580738 RNF13O43567 381 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 MBNL2Q5VZF2 373 aaKnown RBP16.08■□□□□ 0.16
NDEL1-209ENST00000580738 KIRREL3Q8IZU9 778 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 C10orf111Q8N326 155 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 SPICQ8N5J4 248 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 OR9I1Q8NGQ6 314 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 GTF2H4Q92759 462 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 MCHR2Q969V1 340 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 POM121L2Q96KW2 1035 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF347Q96SE7 839 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 DIRC2Q96SL1 478 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 CITED1Q99966 193 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 MMP27Q9H306 513 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 TMEM106BQ9NUM4 274 aa16.08■□□□□ 0.16
NDEL1-209ENST00000580738 C5orf49A4QMS7 147 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 A8MXK9 166 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 CH25HO95992 272 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 CD55P08174 381 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 IDO1P14902 403 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 TNFAIP6P98066 277 aaPredicted RBP16.07■□□□□ 0.16
NDEL1-209ENST00000580738 BST1Q10588 318 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 FADDQ13158 208 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 ZMYND11Q15326 602 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 HIST3H3Q16695 136 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 NRN1LQ496H8 165 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 SLC2A7Q6PXP3 512 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 LINC00114Q6XXX2 140 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 MSANTD1Q6ZTZ1 278 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 RFPL4BQ6ZWI9 263 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 LRRC28Q86X40 367 aaPredicted RBP16.07■□□□□ 0.16
NDEL1-209ENST00000580738 C1QL4Q86Z23 238 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 BEX1Q9HBH7 125 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 TNFRSF19Q9NS68 423 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 CYSLTR2Q9NS75 346 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 ZDHHC8Q9ULC8 765 aa16.07■□□□□ 0.16
NDEL1-209ENST00000580738 TANC2Q9HCD6 1990 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 A0A1B0GUS0 222 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 F5H0A9 414 aaPredicted RBP16.06■□□□□ 0.16
NDEL1-209ENST00000580738 M0QZ24 198 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 PLATP00750 562 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 HOXB9P17482 250 aaPredicted RBP16.06■□□□□ 0.16
NDEL1-209ENST00000580738 CDAP32320 146 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 POLR2JP52435 117 aaKnown RBP16.06■□□□□ 0.16
NDEL1-209ENST00000580738 CLRN1P58418 232 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 KRTAP10-3P60369 221 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 RELBQ01201 579 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 MPP2Q14168 576 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF74Q16587 644 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 TMEM155Q4W5P6 130 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 SWT1Q5T5J6 900 aaKnown RBP16.06■□□□□ 0.16
NDEL1-209ENST00000580738 NXNQ6DKJ4 435 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 REEP3Q6NUK4 255 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 BRICD5Q6PL45 260 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 KRT73Q86Y46 540 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 HIPK4Q8NE63 616 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 AKR7LQ8NHP1 331 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 ARHGDIGQ99819 225 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 SPATA5L1Q9BVQ7 753 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 RAD21L1Q9H4I0 556 aa16.06■□□□□ 0.16
NDEL1-209ENST00000580738 EIF3KQ9UBQ5 218 aaKnown RBP16.06■□□□□ 0.16
NDEL1-209ENST00000580738 HDAC3O15379 428 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 MGRN1O60291 552 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 NGFP01138 241 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 IGHG1P01857 330 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF32P17041 273 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 LIPAP38571 399 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF84P51523 738 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 RAG2P55895 527 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 BTG1P62324 171 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 CDK6Q00534 326 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 PAX2Q02962 417 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 DEFB112Q30KQ8 113 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 ESCO2Q56NI9 601 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 HHATQ5VTY9 493 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 OLFML2AQ68BL7 652 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF283Q8N7M2 679 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 OR4F5Q8NH21 305 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 ABHD4Q8TB40 342 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.05■□□□□ 0.16
NDEL1-209ENST00000580738 MRPL13Q9BYD1 178 aaKnown RBP16.05■□□□□ 0.16
NDEL1-209ENST00000580738 NANSQ9NR45 359 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 SDR39U1Q9NRG7 319 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-209ENST00000580738 SLC25A37Q9NYZ2 338 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 ZIM2Q9NZV7 527 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 OR5V1Q9UGF6 321 aa16.05■□□□□ 0.16
NDEL1-209ENST00000580738 TRAV40A0A0B4J280 105 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 KITP10721 976 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 AQP1P29972 269 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 GDI2P50395 445 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms