RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 ATCAYQ86WG3 371 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 UBE2J2Q8N2K1 259 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 STX19Q8N4C7 294 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 SLC26A10Q8NG04 563 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 OR51G2Q8NGK0 314 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ZNRF4Q8WWF5 429 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 STARD4Q96DR4 205 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 LGALS12Q96DT0 336 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 BBC3Q96PG8 261 aaPredicted RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 INTS14Q96SY0 518 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 MNTQ99583 582 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 COPS4Q9BT78 406 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 PIGMQ9H3S5 423 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ADGRL4Q9HBW9 690 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 FGF20Q9NP95 211 aaPredicted RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 ZNF629Q9UEG4 869 aaPredicted RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 KCNG2Q9UJ96 466 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ZFYVE26Q68DK2 2539 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 PRRC2CQ9Y520 2896 aaKnown RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 A0A1W2PPL8 197 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 MAGEA13PA6NCF6 341 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 PTGES3LE9PB15 166 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 RAB36O95755 333 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 CGAP01215 116 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 LYNP07948 512 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ZNF823P16415 610 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 EEF1B2P24534 225 aaKnown RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 EDNRAP25101 427 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ACTC1P68032 377 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ACTA1P68133 377 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 MRPS34P82930 218 aaKnown RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 TLE1Q04724 770 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ST3GAL4Q11206 333 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 KCNMB1Q16558 191 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 CEACAM16Q2WEN9 425 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 SLC16A9Q7RTY1 509 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 BTLAQ7Z6A9 289 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 TIGD4Q8IY51 512 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 ZNF511Q8NB15 262 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 NAXEQ8NCW5 288 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 OR10H5Q8NGA6 315 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 RND1Q92730 232 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 TMEM80Q96HE8 168 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 MYCBPQ99417 103 aaPredicted RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 NELFAQ9H3P2 528 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 SEC61A2Q9H9S3 476 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 INPP5EQ9NRR6 644 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 PRSS50Q9UI38 385 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 DIMT1Q9UNQ2 313 aaKnown RBP9.47□□□□□ -0.89
SS18-213ENST00000579640 UGT2A1Q9Y4X1 527 aa9.47□□□□□ -0.89
SS18-213ENST00000579640 IGSF10Q6WRI0 2623 aa9.46□□□□□ -0.89
SS18-213ENST00000579640 SPENQ96T58 3664 aaKnown RBP9.46□□□□□ -0.89
SS18-213ENST00000579640 A0A0G2JNJ9 132 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 A0A1B0GUH1 482 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 TVP23AA6NH52 213 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 ZNF99A8MXY4 864 aaPredicted RBP9.46□□□□□ -0.9
SS18-213ENST00000579640 RGS10O43665 173 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 TMCC2O75069 709 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 IGHV3-9P01782 118 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 CDK1P06493 297 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 OR2T7P0C7T2 308 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 MSR1P21757 451 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 MPGP29372 298 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 ENTPD1P49961 510 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 LSM6P62312 80 aaKnown RBP9.46□□□□□ -0.9
SS18-213ENST00000579640 FAPQ12884 760 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 MRPL49Q13405 166 aaKnown RBP9.46□□□□□ -0.9
SS18-213ENST00000579640 TEX30Q5JUR7 227 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 RNLSQ5VYX0 342 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 MTFR2Q6P444 385 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 B3GLCTQ6Y288 498 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 Q6ZT83 130 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 BEND4Q6ZU67 534 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 ZNF627Q7L945 461 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 LINGO2Q7L985 606 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 SHFQ7M4L6 423 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 PRSS48Q7RTY5 328 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 ERI1Q8IV48 349 aaKnown RBP9.46□□□□□ -0.9
SS18-213ENST00000579640 OR52I1Q8NGK6 324 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 OR2T27Q8NH04 317 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 C11orf40Q8WZ69 217 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 FOXB1Q99853 325 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 WACQ9BTA9 647 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 JAM3Q9BX67 310 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 SIAEQ9HAT2 523 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 POLE4Q9NR33 117 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 TMEM38BQ9NVV0 291 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 MRPL22Q9NWU5 206 aaKnown RBP9.46□□□□□ -0.9
SS18-213ENST00000579640 Q9UFV3 132 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 TMEM14AQ9Y6G1 99 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 COMMD3-BMI1R4GMX3 469 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 POLEQ07864 2286 aa9.46□□□□□ -0.9
SS18-213ENST00000579640 A0A087WXM4 84 aa9.45□□□□□ -0.9
SS18-213ENST00000579640 J3QRE1 110 aa9.45□□□□□ -0.9
SS18-213ENST00000579640 CCL21O00585 134 aa9.45□□□□□ -0.9
SS18-213ENST00000579640 DVL2O14641 736 aa9.45□□□□□ -0.9
SS18-213ENST00000579640 MSTNO14793 375 aa9.45□□□□□ -0.9
SS18-213ENST00000579640 PHYHO14832 338 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms