RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CH25HO95992 272 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 IGHMP01871 453 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 ADH4P08319 380 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 MMP7P09237 267 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 HOXB9P17482 250 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZFP36P26651 326 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 STOMP27105 288 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 AQP1P29972 269 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 STX1BP61266 288 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF154Q13106 437 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 SCARB2Q14108 478 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 PABPC1L2AQ5JQF8 200 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 SPATA46Q5T0L3 261 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 THEM4Q5T1C6 240 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 MBNL2Q5VZF2 373 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 TTC33Q6PID6 262 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 HDDC2Q7Z4H3 204 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 MCHR2Q969V1 340 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 C1orf147Q96MC9 270 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 MCHR1Q99705 422 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC19A3Q9BZV2 496 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 MS4A7Q9GZW8 240 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 TMEM38AQ9H6F2 299 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 CCNB1IP1Q9NPC3 277 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC25A37Q9NYZ2 338 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF229Q9UJW7 825 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 POLR3KQ9Y2Y1 108 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 NPTNQ9Y639 398 aa9.85□□□□□ -0.83
CTDNEP1-212ENST00000576613 ARHGAP32A7KAX9 2087 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 A0A1W2PRG6 482 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 C5orf49A4QMS7 147 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZSCAN5BA6NJL1 495 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 CENPBD1B2RD01 187 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 MCIDASD6RGH6 385 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 H3BSA7 217 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 SBK2P0C263 348 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 UMPSP11172 480 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF12P17014 697 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 MPV17P39210 176 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 MTNR1AP48039 350 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 GDI2P50395 445 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 HIST3H3Q16695 136 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 LRIF1Q5T3J3 769 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 LINC00114Q6XXX2 140 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 NANOGNBQ7Z5D8 188 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF101Q8IZC7 436 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 MREGQ8N565 214 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 ANKRD42Q8N9B4 389 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 NOXO1Q8NFA2 376 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 KLF14Q8TD94 323 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 GEMIN6Q8WXD5 167 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 MARS2Q96GW9 593 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 OR52B2Q96RD2 323 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 ZNF347Q96SE7 839 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 OR2J1Q9GZK6 312 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 SIAEQ9HAT2 523 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 MMP26Q9NRE1 261 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 STX18Q9P2W9 335 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 ANGPT4Q9Y264 503 aa9.84□□□□□ -0.83
CTDNEP1-212ENST00000576613 CPSF4LA6NMK7 179 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 EVPLLA8MZ36 301 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 M0R3H8 397 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 KPNA4O00629 521 aaPredicted RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 IGHV2-70P01814 119 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 CD55P08174 381 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 ASAH2BP0C7U1 165 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 NR2C1P13056 603 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 TNFSF4P23510 183 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 WNT5AP41221 380 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 DAP3P51398 398 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 MRPS34P82930 218 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 TNFAIP6P98066 277 aaPredicted RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 OCLNQ16625 522 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 TMEM155Q4W5P6 130 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 KLF17Q5JT82 389 aaPredicted RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 ENTPD8Q5MY95 495 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 C10orf128Q5T292 105 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZER1Q7Z7L7 766 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 MSRB3Q8IXL7 192 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 BCL6BQ8N143 479 aaPredicted RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 C10orf111Q8N326 155 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 SMYD1Q8NB12 490 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 ABHD4Q8TB40 342 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC25A40Q8TBP6 338 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 ADAMTS16Q8TE57 1224 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 MPP4Q96JB8 637 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 POM121L2Q96KW2 1035 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 DCLRE1CQ96SD1 692 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 WFDC6Q9BQY6 131 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 MRPL13Q9BYD1 178 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 PATZ1Q9HBE1 687 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 NPHS2Q9NP85 383 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 OR5V1Q9UGF6 321 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 INSIG2Q9Y5U4 225 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 GMEB1Q9Y692 573 aa9.83□□□□□ -0.84
CTDNEP1-212ENST00000576613 TRAPPC13A5PLN9 417 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 GMNCA6NCL1 334 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 A8MXK9 166 aa9.82□□□□□ -0.84
CTDNEP1-212ENST00000576613 BLOC1S5-TXNDC5H3BN57 136 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms