RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 NR4A2P43354 598 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 BIDP55957 195 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 CLDN12P56749 244 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 ROM1Q03395 351 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 SNTA1Q13424 505 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 CCDC157Q569K6 752 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 ZBTB44Q8NCP5 570 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 OR11G2Q8NGC1 345 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 M1APQ8TC57 530 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 RNF128Q8TEB7 428 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 TSEN15Q8WW01 171 aaKnown RBP12.58□□□□□ -0.4
VPS33B-208ENST00000574755 ADAMTS14Q8WXS8 1223 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 OR5B2Q96R09 309 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF160Q9HCG1 818 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 RPH3AQ9Y2J0 694 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-208ENST00000574755 A0A1W2PNR3 127 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 A0A1W2PNV4 684 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.58□□□□□ -0.4
VPS33B-208ENST00000574755 RAF1P04049 648 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 MAS1P04201 325 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 FAM157BP0CG42 384 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 RIDAP52758 137 aaKnown RBP12.58□□□□□ -0.4
VPS33B-208ENST00000574755 RNASE12Q5GAN4 147 aaKnown RBP12.58□□□□□ -0.4
VPS33B-208ENST00000574755 TEX30Q5JUR7 227 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 DCAF12Q5T6F0 453 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 FDX2Q6P4F2 183 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 FADS6Q8N9I5 356 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 SLC26A10Q8NG04 563 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 OR6F1Q8NGZ6 308 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 OR52N5Q8NH56 324 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 UBASH3BQ8TF42 649 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 FANCFQ9NPI8 374 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF221Q9UK13 617 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 LRP12Q9Y561 859 aa12.58□□□□□ -0.4
VPS33B-208ENST00000574755 PCDHGA9Q9Y5G4 932 aaKnown RBP12.58□□□□□ -0.4
VPS33B-208ENST00000574755 BDP1A6H8Y1 2624 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 A0A0B4J293 547 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 ANXA2P2A6NMY6 339 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 B4E171 279 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 GPR171O14626 319 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 WNT11O96014 354 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 PNPP00491 289 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 ANXA2P07355 339 aaKnown RBP12.57□□□□□ -0.4
VPS33B-208ENST00000574755 SP9P0CG40 484 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 ADRA2CP18825 462 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 SFTPDP35247 375 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 TSPAN7P41732 249 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 MMP15P51511 669 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 CCR9P51686 369 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 MDGA2Q7Z553 956 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 GPAT4Q86UL3 456 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 CMTM4Q8IZR5 234 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 DNAAF1Q8NEP3 725 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 UPRTQ96BW1 309 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 CMTM3Q96MX0 182 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 CDCP1Q9H5V8 836 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 B3GAT1Q9P2W7 334 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 SLC22A13Q9Y226 551 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 TRAV8-7A0A075B6U6 113 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 IGKV1D-43A0A0B4J1Z2 117 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 RAD1O60671 282 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM127O75204 238 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 STK17BO94768 372 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF883P0CG24 379 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 DPP4P27487 766 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 EIF1P41567 113 aaKnown RBP12.57□□□□□ -0.4
VPS33B-208ENST00000574755 SRP9P49458 86 aaKnown RBP12.57□□□□□ -0.4
VPS33B-208ENST00000574755 SSR4P51571 173 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 GPR176Q14439 515 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 TATDN3Q17R31 274 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 BAIAP2L2Q6UXY1 529 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 FCRLAQ7L513 359 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 DCXRQ7Z4W1 244 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 PLCZ1Q86YW0 608 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 UEVLDQ8IX04 471 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 IZUMO1Q8IYV9 350 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM156Q8N614 296 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 CAMK2AQ9UQM7 478 aa12.57□□□□□ -0.4
VPS33B-208ENST00000574755 COL27A1Q8IZC6 1860 aaPredicted RBP12.57□□□□□ -0.4
VPS33B-208ENST00000574755 FREM2Q5SZK8 3169 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 TRBV5-7A0A0A0MS05 114 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 KHDRBS3O75525 346 aaKnown RBP12.56□□□□□ -0.4
VPS33B-208ENST00000574755 ADRB1P08588 477 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 CD3GP09693 182 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 ADH6P28332 368 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 PTGS2P35354 604 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 DGCR2P98153 550 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-208ENST00000574755 HACD4Q5VWC8 232 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM225Q6GV28 225 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 DBX2Q6ZNG2 339 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 NDUFAF7Q7L592 441 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 LRRTM1Q86UE6 522 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 LINC00346Q8IVM7 164 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 TOMM5Q8N4H5 51 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 SLC25A43Q8WUT9 341 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-208ENST00000574755 MRI1Q9BV20 369 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms