RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CDH15P55291 814 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 CDC42P60953 191 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 CXCR4P61073 352 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 SNRPD2P62316 118 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 ARF1P84077 181 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 TEKQ02763 1124 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 MVKQ03426 396 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 CD47Q08722 323 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 PPP1R8Q12972 351 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 NPRL3Q12980 569 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 PMS2P3Q13401 168 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 DYNC1I2Q13409 638 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 LAPTM4AQ15012 233 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 NEDD8Q15843 81 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 CEACAM16Q2WEN9 425 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 KCTD8Q6ZWB6 473 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 LINGO2Q7L985 606 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 TSPYL5Q86VY4 417 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 PARP8Q8N3A8 854 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 ZNF525Q8N782 197 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 VANGL1Q8TAA9 524 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 ADAMTS16Q8TE57 1224 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 IPCEF1Q8WWN9 437 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 FAM168AQ92567 244 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 FNDC11Q9BVV2 318 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 PRRG3Q9BZD7 231 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 CCDC90BQ9GZT6 254 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 EVA1AQ9H8M9 152 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 CRLF2Q9HC73 371 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 GPR35Q9HC97 309 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 MOV10Q9HCE1 1003 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 B3GAT2Q9NPZ5 323 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 YAE1D1Q9NRH1 226 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 B3GAT1Q9P2W7 334 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 CORINQ9Y5Q5 1042 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 FKBP7Q9Y680 259 aa8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 SONP18583 2426 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-216ENST00000574344 ARPC4-TTLL3A0A0A6YYG9 625 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 LRRN3E7EW58 273 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 C11orf98E9PRG8 122 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 H7C417 338 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 M0R3G1 203 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 KPNA4O00629 521 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 TRAF3IP2O43734 574 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 MITFO75030 526 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 ZNF432O94892 652 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 OR6A2O95222 327 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 BGLAPP02818 100 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 CECR9P0C854 216 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 TNFRSF1BP20333 461 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 GGT2P36268 569 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 IDH3GP51553 393 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 DSCR9P59020 149 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 NAAAQ02083 359 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 PUDPQ08623 228 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 CARTPTQ16568 116 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 SLC46A3Q7Z3Q1 461 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 CLVS1Q8IUQ0 354 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 SCAIQ8N9R8 606 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 AQP11Q8NBQ7 271 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 ADPRHL1Q8NDY3 354 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 OR4C15Q8NGM1 316 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 OR6N1Q8NGY5 312 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 OR52J3Q8NH60 311 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 FAM81AQ8TBF8 368 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 FCGR1BQ92637 280 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 BCL2L2Q92843 193 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 NMD3Q96D46 503 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 PRRC1Q96M27 445 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 OR2M2Q96R28 347 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 FEVQ99581 238 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 VRK1Q99986 396 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 WFDC6Q9BQY6 131 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 EMC6Q9BV81 110 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 KATNB1Q9BVA0 655 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 RSPO3Q9BXY4 272 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 RBM38Q9H0Z9 239 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 NELFAQ9H3P2 528 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 MED29Q9NX70 200 aa8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 NDRG4Q9ULP0 352 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-216ENST00000574344 SLC35F4A4IF30 521 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 ZNF726A6NNF4 738 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 ZNF99A8MXY4 864 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 RPL36A-HNRNPH2H7BZ11 118 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 RGS10O43665 173 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 CHP2O43745 196 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 TLX2O43763 284 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 CD5LO43866 347 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 OR10H3O60404 316 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 LY6HO94772 140 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 CELA3BP08861 270 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 CSF3P09919 207 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 ADORA3P0DMS8 318 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 CD79AP11912 226 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 HLA-DOBP13765 273 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 HOXB1P14653 301 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 SLC25A16P16260 332 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 GSTM3P21266 225 aa8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 YAP1P46937 504 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-216ENST00000574344 EFNA4P52798 201 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms