RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 C8orf82Q6P1X6 216 aaPredicted RBP11.8□□□□□ -0.52
RAB40B-204ENST00000571554 PODNL1Q6PEZ8 512 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF730Q6ZMV8 503 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 CBLL1Q75N03 491 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 HDDC2Q7Z4H3 204 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF786Q8N393 782 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 CPEB3Q8NE35 698 aaKnown RBP11.8□□□□□ -0.52
RAB40B-204ENST00000571554 AKR7LQ8NHP1 331 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 LIPHQ8WWY8 451 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 GEMIN6Q8WXD5 167 aaKnown RBP11.8□□□□□ -0.52
RAB40B-204ENST00000571554 GTF3AQ92664 365 aaKnown RBP11.8□□□□□ -0.52
RAB40B-204ENST00000571554 FAM162AQ96A26 154 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 NABP1Q96AH0 204 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 NMD3Q96D46 503 aaKnown RBP11.8□□□□□ -0.52
RAB40B-204ENST00000571554 TXNIPQ9H3M7 391 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 EFCAB1Q9HAE3 211 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 TAAR3PQ9P1P4 343 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 FBXO9Q9UK97 447 aaPredicted RBP11.8□□□□□ -0.52
RAB40B-204ENST00000571554 COL6A5A8TX70 2615 aa11.8□□□□□ -0.52
RAB40B-204ENST00000571554 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 IQCMA0A1B0GVH7 501 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 EFCAB9A8MZ26 197 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 LILRA1O75019 489 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 ENTPD5O75356 428 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 IFNA2P01563 188 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 MMP7P09237 267 aaPredicted RBP11.79□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF32P17041 273 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 COL8A2P25067 703 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 GIFP27352 417 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 IFNA8P32881 189 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 APLNRP35414 380 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 MAGEB1P43366 347 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 EVX1P49640 407 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 RPL27P61353 136 aaKnown RBP11.79□□□□□ -0.52
RAB40B-204ENST00000571554 PLP2Q04941 152 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 NKPD1Q17RQ9 610 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 FAM120AOSQ5T036 256 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 SPATA46Q5T0L3 261 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 SLC25A47Q6Q0C1 308 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 RNF148Q8N7C7 305 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 LRRC75AQ8NAA5 344 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF540Q8NDQ6 660 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 KCTD14Q9BQ13 255 aaPredicted RBP11.79□□□□□ -0.52
RAB40B-204ENST00000571554 CCNB1IP1Q9NPC3 277 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 EGFL7Q9UHF1 273 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 AP3M1Q9Y2T2 418 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 MXRA5Q9NR99 2828 aa11.79□□□□□ -0.52
RAB40B-204ENST00000571554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.78□□□□□ -0.52
RAB40B-204ENST00000571554 A0A087WUU8 490 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 A0A1W2PPL8 197 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 CENPBD1B2RD01 187 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 CDC42EP2O14613 210 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 MGRN1O60291 552 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 PRSS23O95084 383 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 LAP3P28838 519 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF133P52736 654 aaPredicted RBP11.78□□□□□ -0.52
RAB40B-204ENST00000571554 CHN2P52757 468 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 PSME3P61289 254 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 MRPS34P82930 218 aaKnown RBP11.78□□□□□ -0.52
RAB40B-204ENST00000571554 PRKCDQ05655 676 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 FHL1Q13642 323 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 RIN1Q13671 783 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 OTPQ5XKR4 325 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 TSEN54Q7Z6J9 526 aaKnown RBP11.78□□□□□ -0.52
RAB40B-204ENST00000571554 OAFQ86UD1 273 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF519Q8TB69 540 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 SYNPRQ8TBG9 265 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 HOPXQ9BPY8 73 aaPredicted RBP11.78□□□□□ -0.52
RAB40B-204ENST00000571554 KCNN2Q9H2S1 579 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 MS4A5Q9H3V2 200 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 SIAEQ9HAT2 523 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 STX18Q9P2W9 335 aaKnown RBP11.78□□□□□ -0.52
RAB40B-204ENST00000571554 ADAM18Q9Y3Q7 739 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 V9GYQ6 96 aa11.78□□□□□ -0.52
RAB40B-204ENST00000571554 WNT9BO14905 357 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 PHF1O43189 567 aaPredicted RBP11.77□□□□□ -0.53
RAB40B-204ENST00000571554 CDC14BO60729 498 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 DIRAS1O95057 198 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 PTHP01270 115 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 IGHMP01871 453 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 TACSTD2P09758 323 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 ZNF26P17031 533 aaPredicted RBP11.77□□□□□ -0.53
RAB40B-204ENST00000571554 SRD5A1P18405 259 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 STOMP27105 288 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 RPL4P36578 427 aaKnown RBP11.77□□□□□ -0.53
RAB40B-204ENST00000571554 WNT5AP41221 380 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 SLC9A3P48764 834 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 UCP2P55851 309 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.53
RAB40B-204ENST00000571554 CCL8P80075 99 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 NRN1LQ496H8 165 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 DPPA2Q7Z7J5 298 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 FAM86B1Q8N7N1 296 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 FAM156AQ8NDB6 213 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 OR1J2Q8NGS2 313 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 OR1J1Q8NGS3 322 aa11.77□□□□□ -0.53
RAB40B-204ENST00000571554 ACOT11Q8WXI4 607 aaPredicted RBP11.77□□□□□ -0.53
RAB40B-204ENST00000571554 FAM46AQ96IP4 442 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms