RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ATP4BP51164 291 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 CLRN1P58418 232 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 HSF2Q03933 536 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 MELKQ14680 651 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 ZNF718Q3SXZ3 478 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 ARMCX4Q5H9R4 360 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 TREML4Q6UXN2 200 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 HIST3H2AQ7L7L0 130 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 HIST1H2ACQ93077 130 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 LRRC58Q96CX6 371 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 MCHR1Q99705 422 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 KCNN2Q9H2S1 579 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 CYSLTR2Q9NS75 346 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 UBAP1Q9NZ09 502 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 SLAMF8Q9P0V8 285 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 NUP50Q9UKX7 468 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 TRIM33Q9UPN9 1127 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 GMEB1Q9Y692 573 aa16.1■□□□□ 0.17
SCARF1-204ENST00000570902 WNK2Q9Y3S1 2297 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 A0A0G2JND7 137 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 UBOX5O94941 541 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 CH25HO95992 272 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 AQP1P29972 269 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 LIPAP38571 399 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 MMP15P51511 669 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 DEFA6Q01524 100 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 TUSC1Q2TAM9 212 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 PAGE3Q5JUK9 113 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 TTC33Q6PID6 262 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-204ENST00000570902 ZNF771Q7L3S4 317 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-204ENST00000570902 MSRB3Q8IXL7 192 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 C1orf174Q8IYL3 243 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 C10orf111Q8N326 155 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 LRRC17Q8N6Y2 441 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 HIPK4Q8NE63 616 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 MCHR2Q969V1 340 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 WFDC6Q9BQY6 131 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 UNKLQ9H9P5 680 aaKnown RBP16.09■□□□□ 0.17
SCARF1-204ENST00000570902 MED4Q9NPJ6 270 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 EIF3KQ9UBQ5 218 aaKnown RBP16.09■□□□□ 0.17
SCARF1-204ENST00000570902 CGGBP1Q9UFW8 167 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-204ENST00000570902 ZNF229Q9UJW7 825 aa16.09■□□□□ 0.17
SCARF1-204ENST00000570902 DNAJC9-AS1A6NH13 148 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 POM121CA8CG34 1229 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 CENPBD1B2RD01 187 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 VIMP08670 466 aaKnown RBP16.08■□□□□ 0.16
SCARF1-204ENST00000570902 MMP7P09237 267 aaPredicted RBP16.08■□□□□ 0.16
SCARF1-204ENST00000570902 CCNOP22674 350 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 STOMP27105 288 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 IL13RA1P78552 427 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 HIST3H3Q16695 136 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 HDDC2Q7Z4H3 204 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 LRRC18Q8N456 261 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 STON2Q8WXE9 905 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 SLC19A3Q9BZV2 496 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 RABEP2Q9H5N1 569 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 PLEK2Q9NYT0 353 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 LEF1Q9UJU2 399 aaPredicted RBP16.08■□□□□ 0.16
SCARF1-204ENST00000570902 PURGQ9UJV8 347 aaKnown RBP16.08■□□□□ 0.16
SCARF1-204ENST00000570902 ANGPT4Q9Y264 503 aa16.08■□□□□ 0.16
SCARF1-204ENST00000570902 EVPLLA8MZ36 301 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 M0R3H8 397 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 ADH4P08319 380 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 GPX2P18283 190 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 GUCY1A3Q02108 690 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 SF3A3Q12874 501 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCARF1-204ENST00000570902 BAMBIQ13145 260 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 ZMAT1Q5H9K5 638 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 PABPC1L2AQ5JQF8 200 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 THEM4Q5T1C6 240 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 MBNL2Q5VZF2 373 aaKnown RBP16.07■□□□□ 0.16
SCARF1-204ENST00000570902 SMYD1Q8NB12 490 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 SYT14Q8NB59 555 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 DEFB108BQ8NET1 73 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 IPCEF1Q8WWN9 437 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-204ENST00000570902 SLC25A28Q96A46 364 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 MARS2Q96GW9 593 aaKnown RBP16.07■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF347Q96SE7 839 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 DIRC2Q96SL1 478 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 ARHGDIGQ99819 225 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 SIKE1Q9BRV8 207 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 SIAEQ9HAT2 523 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 CCNB1IP1Q9NPC3 277 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 VAPAQ9P0L0 249 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 ZDHHC8Q9ULC8 765 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 AUP1Q9Y679 476 aa16.07■□□□□ 0.16
SCARF1-204ENST00000570902 A0A1W2PRG6 482 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 CPSF4LA6NMK7 179 aaKnown RBP16.06■□□□□ 0.16
SCARF1-204ENST00000570902 MCIDASD6RGH6 385 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 RNASE1P07998 156 aaKnown RBP16.06■□□□□ 0.16
SCARF1-204ENST00000570902 ASAH2BP0C7U1 165 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 UMPSP11172 480 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 ZFP36P26651 326 aaKnown RBP16.06■□□□□ 0.16
SCARF1-204ENST00000570902 ENTPD8Q5MY95 495 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 SPATA46Q5T0L3 261 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 NANOGNBQ7Z5D8 188 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 ZNF101Q8IZC7 436 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 SPICQ8N5J4 248 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 NOXO1Q8NFA2 376 aa16.06■□□□□ 0.16
SCARF1-204ENST00000570902 MPP4Q96JB8 637 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms