RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 Q96M85 177 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 GPX7Q96SL4 187 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-220ENST00000569916 GPA33Q99795 319 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 REG4Q9BYZ8 158 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 RNF121Q9H920 327 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 SIAEQ9HAT2 523 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 IL1RAPQ9NPH3 570 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 ZANQ9Y493 2812 aa11.25□□□□□ -0.61
CNOT1-220ENST00000569916 SETD2Q9BYW2 2564 aaPredicted RBP11.24□□□□□ -0.61
CNOT1-220ENST00000569916 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
CNOT1-220ENST00000569916 C2CD3Q4AC94 2353 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 IGHV4-30-2A0A087WSY4 118 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 TCRBV5S2A0A599 114 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 TMEM129A0AVI4 362 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 H7C1C5 153 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 MGRN1O60291 552 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 LY6HO94772 140 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 NDUFB2O95178 105 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 RRM2P31350 389 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 PPOXP50336 477 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 SMIM11AP58511 58 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 LCN6P62502 163 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 KRTAP1-1Q07627 177 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 CLEC2AQ6UVW9 174 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 THSD4Q6ZMP0 1018 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 FOXL2NBQ6ZUU3 175 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 ZDHHC21Q8IVQ6 265 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 SVOPLQ8N434 492 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 PAQR4Q8N4S7 273 aaPredicted RBP11.24□□□□□ -0.61
CNOT1-220ENST00000569916 MAPK1IP1LQ8NDC0 245 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 SLC30A7Q8NEW0 376 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 OR10H5Q8NGA6 315 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 ZNF570Q96NI8 536 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 RBP7Q96R05 134 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 NDEL1Q9GZM8 345 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 MUC13Q9H3R2 512 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 KRCC1Q9NPI7 259 aaPredicted RBP11.24□□□□□ -0.61
CNOT1-220ENST00000569916 NRIP3Q9NQ35 241 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 GRHPRQ9UBQ7 328 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 AURKCQ9UQB9 309 aa11.24□□□□□ -0.61
CNOT1-220ENST00000569916 A0A096LNT2 108 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 TEX13CA0A0J9YWL9 993 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 UNC119BA6NIH7 251 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
CNOT1-220ENST00000569916 IGFBP1P08833 259 aaPredicted RBP11.23□□□□□ -0.61
CNOT1-220ENST00000569916 CCL2P13500 99 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 ZNF32P17041 273 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 GLRXP35754 106 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 MAGEA2P43356 314 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 GALK2Q01415 458 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
CNOT1-220ENST00000569916 SGCAQ16586 387 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 MTX3Q5HYI7 312 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 FAM27BQ5VT28 67 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 LCN8Q6JVE9 175 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 ZER1Q7Z7L7 766 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 MRPL24Q96A35 216 aaKnown RBP11.23□□□□□ -0.61
CNOT1-220ENST00000569916 RASD2Q96D21 266 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 DOK1Q99704 481 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 VRK1Q99986 396 aaPredicted RBP11.23□□□□□ -0.61
CNOT1-220ENST00000569916 RHNO1Q9BSD3 238 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 MRPL37Q9BZE1 423 aaKnown RBP11.23□□□□□ -0.61
CNOT1-220ENST00000569916 C1orf198Q9H425 327 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 TAS2R1Q9NYW7 299 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 IL20RAQ9UHF4 553 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 SLC7A8Q9UHI5 535 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 PRPF19Q9UMS4 504 aaKnown RBP11.23□□□□□ -0.61
CNOT1-220ENST00000569916 CMAHPQ9Y471 501 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 SPEF1Q9Y4P9 236 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 FKBP7Q9Y680 259 aa11.23□□□□□ -0.61
CNOT1-220ENST00000569916 A0A1W2PPL8 197 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 SLC22A23A1A5C7 686 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 PRSS37A4D1T9 235 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 VSTM5A8MXK1 200 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 XKRYO14609 159 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 AHCYL1O43865 530 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 SNAP29O95721 258 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 CSF3P09919 207 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 HOXB4P17483 251 aaPredicted RBP11.22□□□□□ -0.61
CNOT1-220ENST00000569916 FPR3P25089 353 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 LAP3P28838 519 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 SDHAP31040 664 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 YLPM1P49750 1951 aaKnown RBP11.22□□□□□ -0.61
CNOT1-220ENST00000569916 DSCR9P59020 149 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 RPS23P62266 143 aaKnown RBP11.22□□□□□ -0.61
CNOT1-220ENST00000569916 MS4A2Q01362 244 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 PLP2Q04941 152 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 ENDOGQ14249 297 aaKnown RBP11.22□□□□□ -0.61
CNOT1-220ENST00000569916 TRIM25Q14258 630 aaKnown RBP11.22□□□□□ -0.61
CNOT1-220ENST00000569916 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 TBC1D28Q2M2D7 210 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 PABPC1L2AQ5JQF8 200 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 GPR139Q6DWJ6 353 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 CPEB3Q8NE35 698 aaKnown RBP11.22□□□□□ -0.61
CNOT1-220ENST00000569916 FANK1Q8TC84 345 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 BCAS4Q8TDM0 211 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 C10orf105Q8TEF2 133 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 FAM168AQ92567 244 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 C1orf21Q9H246 121 aa11.22□□□□□ -0.61
CNOT1-220ENST00000569916 KCNN2Q9H2S1 579 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms