RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 STK16O75716 305 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 GBAP04062 536 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 ITPKBP27987 946 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 ACAA2P42765 397 aaKnown RBP9.88□□□□□ -0.83
CLK3-226ENST00000569406 MMP15P51511 669 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 WDR5P61964 334 aaKnown RBP9.88□□□□□ -0.83
CLK3-226ENST00000569406 NHLH1Q02575 133 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TTLL9Q3SXZ7 439 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 FAM27D1Q5T7N8 215 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 OR8G2PQ6IF36 304 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 ANGPTL5Q86XS5 388 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 SORCS1Q8WY21 1168 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 SMARCD2Q92925 531 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 SLC6A18Q96N87 628 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 KPTNQ9Y664 436 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 COL4A3Q01955 1670 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TBC1D3DA0A087WVF3 549 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TBC1D3IA0A087WXS9 549 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TBC1D3EA0A087X179 549 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TBC1D3LB9A6J9 549 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 WNT9AO14904 365 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 MTX2O75431 263 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 RPL19P84098 196 aaKnown RBP9.88□□□□□ -0.83
CLK3-226ENST00000569406 POM121L1PQ3SYA9 428 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TBC1D3CQ6IPX1 549 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 C1QL4Q86Z23 238 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TBC1D3Q8IZP1 549 aaPredicted RBP9.88□□□□□ -0.83
CLK3-226ENST00000569406 IQCF1Q8N6M8 205 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 HPSE2Q8WWQ2 592 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 MAL2Q969L2 176 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 ADGRG7Q96K78 797 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 TRMT61BQ9BVS5 477 aaKnown RBP9.88□□□□□ -0.83
CLK3-226ENST00000569406 RDH14Q9HBH5 336 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 NCDNQ9UBB6 729 aa9.88□□□□□ -0.83
CLK3-226ENST00000569406 A0A0C4DFX4 3053 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 A0A1W2PRU2 124 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ANKUB1A6NFN9 424 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ZAR1LA6NP61 321 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 TRGC2P03986 189 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 OR4A8P0C604 315 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 SNRPBP14678 240 aaKnown RBP9.87□□□□□ -0.83
CLK3-226ENST00000569406 SERPINA2P20848 420 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 EPHA1P21709 976 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 AQP2P41181 271 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ALDH3B1P43353 468 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 PXNP49023 591 aaPredicted RBP9.87□□□□□ -0.83
CLK3-226ENST00000569406 CAV2P51636 162 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 NRG3P56975 720 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 UBE2G2P60604 165 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 CBLL1Q75N03 491 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ADIPOR2Q86V24 386 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 TMEM25Q86YD3 366 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 LYG1Q8N1E2 194 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 MUC20Q8N307 709 aaPredicted RBP9.87□□□□□ -0.83
CLK3-226ENST00000569406 OR2AP1Q8NGE2 309 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 NTNG2Q96CW9 530 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 SEC22AQ96IW7 307 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ORAI3Q9BRQ5 295 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ZFP30Q9Y2G7 519 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 PCDHB11Q9Y5F2 797 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 SDK1Q7Z5N4 2213 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 TRAV14DV4A0A0A6YYC5 116 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ZNF320A2RRD8 509 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 M0R296 226 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 LEFTY2O00292 366 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 PCDH7O60245 1069 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 DFFBO76075 338 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 GASTP01350 101 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 VSIG10L2P0DP72 767 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 DGKAP23743 735 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 CD1CP29017 333 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 BRS3P32247 399 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 RAB7AP51149 207 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 SUCLG1P53597 346 aaKnown RBP9.87□□□□□ -0.83
CLK3-226ENST00000569406 GUK1Q16774 197 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ZNF750Q32MQ0 723 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 SFXN4Q6P4A7 337 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 HEPN1Q6WQI6 88 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ZBTB2Q8N680 514 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 INO80EQ8NBZ0 244 aaPredicted RBP9.87□□□□□ -0.83
CLK3-226ENST00000569406 PIGXQ8TBF5 258 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 M1APQ8TC57 530 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 TEX101Q9BY14 249 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ATG5Q9H1Y0 275 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 OR2S2Q9NQN1 319 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 KLK11Q9UBX7 282 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 ADAM18Q9Y3Q7 739 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 V9GYS6 101 aa9.87□□□□□ -0.83
CLK3-226ENST00000569406 TCF20Q9UGU0 1960 aaKnown RBP9.87□□□□□ -0.83
CLK3-226ENST00000569406 A0A0B4J2A0 478 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 FLRT2O43155 660 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OR2F2O95006 317 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 TBC1D3HP0C7X1 549 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 CCL5P13501 91 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 CD22P20273 847 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 GZMHP20718 246 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 KLF3P57682 345 aaPredicted RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 EIF5AP63241 154 aaKnown RBP9.86□□□□□ -0.83
CLK3-226ENST00000569406 PAX5Q02548 391 aa9.86□□□□□ -0.83
CLK3-226ENST00000569406 OR2F1Q13607 317 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms