RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SERPINE3A8MV23 424 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PLPP2O43688 288 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 GLSO94925 669 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF250P15622 560 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 FABP5Q01469 135 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PTPRCAPQ14761 206 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 UBE2V2Q15819 145 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 WDR74Q6RFH5 385 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MMP21Q8N119 569 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 DTX3Q8N9I9 347 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 NANOS1Q8WY41 292 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 EGLN2Q96KS0 407 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 RPL10LQ96L21 214 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TEAD3Q99594 435 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CPEB1Q9BZB8 566 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MMP24Q9Y5R2 645 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CXorf51AA0A1B0GTR3 108 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 XKRY2A2RUG3 117 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TARM1B6A8C7 271 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 FGF2P09038 288 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 AOAHP28039 575 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 IRF3Q14653 427 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM241Q24JQ0 296 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OR7E24Q6IFN5 339 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF551Q7Z340 670 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MKXQ8IYA7 352 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF383Q8NA42 475 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 RELL2Q8NC24 303 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PCNPQ8WW12 178 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 STACQ99469 402 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TUBA4BQ9H853 241 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 V9GYH0 126 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MAP1LC3B2A6NCE7 125 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 C5orf52A6NGY3 159 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OR52A4PA6NMU1 304 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 SLC17A2O00624 439 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 GATMP50440 423 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PMCHL1Q16048 86 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CST9LP1Q5W188 147 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 POMZP3Q6PJE2 187 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OSTM1Q86WC4 334 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CMTM4Q8IZR5 234 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PGBD5Q8N414 524 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 LHX4Q969G2 390 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MCHR2Q969V1 340 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PKIBQ9C010 78 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MAP1LC3BQ9GZQ8 125 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MARCH5Q9NX47 278 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 NAT8Q9UHE5 227 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OPN4Q9UHM6 478 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MRPS28Q9Y2Q9 187 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 IGKV6D-21A0A0A0MT36 114 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OR6C76A6NM76 312 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 MT-ND6P03923 174 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 GDI1P31150 447 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 C21orf58P58505 322 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 RPS24P62847 133 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PPIAP62937 165 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OC90Q02509 493 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CXCL9Q07325 125 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ATP6V1FQ16864 119 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 NBPF12Q5TAG4 269 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 IL20RBQ6UXL0 311 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 KLHDC8AQ8IYD2 350 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 NPWQ8N729 165 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 GOT1L1Q8NHS2 421 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ST6GALNAC5Q9BVH7 336 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CLEC2DQ9UHP7 191 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ANKRD20A5PA0PJZ0 165 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 PDHXO00330 501 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 PQBP1O60828 265 aaKnown RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 EIF4EP06730 217 aaKnown RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 BCL6P41182 706 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 CDKN1CP49918 316 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 IFITM2Q01629 132 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 SGCAQ16586 387 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 FAM26DQ5JW98 314 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 RNF111Q6ZNA4 994 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 Q7L0L9 218 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ANGPTL5Q86XS5 388 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 REM2Q8IYK8 340 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ABHD6Q9BV23 337 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 SORBS1Q9BX66 1292 aaKnown RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 COL25A1Q9BXS0 654 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 B3GALT1Q9Y5Z6 326 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 C7orf77A4D0Y5 90 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 MBTPS2O43462 519 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 SYNGR4O95473 234 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ADH1BP00325 375 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ACTR1AP61163 376 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 INPP5JQ15735 1006 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 ST3GAL2Q16842 350 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 PRAMEF18Q5VWM3 479 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM225Q6GV28 225 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 NLGN4XQ8N0W4 816 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 NLGN4YQ8NFZ3 816 aaPredicted RBP6.54□□□□□ -1.36
CNOT1-216ENST00000569240 AKR1E2Q96JD6 320 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 NPIPA3F8WFD2 350 aa6.54□□□□□ -1.36
CNOT1-216ENST00000569240 DSCR3O14972 297 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms